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Ladislav Bartos

@ladme.bsky.social

376 followers 840 following 5 posts

Doing computational biochemistry and scientific software development at CEITEC, Masaryk University. github.com/Ladme

Posts Replies Media

Ladislav Bartos @ladme.bsky.social · 15/06/2025

Čeká někdo od MDPI něco jiného?

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Reposted by Ladislav Bartos

VachaLab @labvacha.bsky.social · 23/05/2025

My student Láďa Bartoš @ladme.bsky.social was disappointed by the available tools to calculate order parameters of lipid membranes. His decision? To develop his own—far better, much faster, and more functional—and share it with everyone. Take a look at our preprint! www.biorxiv.org/content/10.1...

biorxiv.org

gorder: Comprehensive tool for calculating lipid order parameters from molecular simulations

Lipid order parameters are an important metric for quantifying the molecular structure of biological membranes. They can be derived from both molecular simulations and experimental measurements, enabl...

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Reposted by Ladislav Bartos

Denys Biriukov @denysbiriukov.bsky.social · 27/02/2025

🚨 All right, since this is a place of sanity now, let’s kick things off with an open PhD position in my team to work on simulating glycans and their interactions. If you’re passionate about computational biophysics and glycobiology, go ahead and apply! Any shares would be greatly appreciated. 🙃

charmm-gui.org

CHARMM-GUI

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Ladislav Bartos @ladme.bsky.social · 15/12/2024

Our lab @labvacha.bsky.social is finally on Bluesky! If you are interested in molecular dynamics, biophysics of lipid membranes, antimicrobial peptides, viruses, liquid-liquid phase-separation and all sorts of other cool stuff, give it a follow :)

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Ladislav Bartos @ladme.bsky.social · 24/11/2024

Now we need a blue butterfly there.

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Ladislav Bartos @ladme.bsky.social · 20/11/2024

You can also implement methods directly for a struct, no need for a trait. Traits are just for shared functionality between different structs :)

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Ladislav Bartos @ladme.bsky.social · 15/11/2024

I see bioinformatics and computational biology as two different fields. Bioinformatics = working specifically with sequence data. Computational biology = MD simulations or some other modelling.

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