Rapid photo-crosslinking in living cells reveals protein–nucleic acid dynamics on a timescale of minutes

Koina: Democratizing machine learning for proteomics research - Nature Communications

Computational Approaches for Pathway‐Centric Analysis of Protein Post‐Translational Modifications

Peptide-RNA photo-crosslinks with tunable RNA chain map protein-RNA interfaces

Enhanced photo-crosslinking in living cells with high-intensity longwave ultraviolet light

Proteomic analyses identify targets, pathways, and cellular consequences of oncogenic KRAS signaling

The human proteome with direct physical access to DNA

Serendipitous and Systematic Chemoproteomic Discovery of MBLAC2, HINT1, and NME1-4 Inhibitors from Histone Deacetylase-Targeting Pharmacophores

sev on X: "Paper alert! We report the first inhibitors for nucleoside kinases NME1-4 and for the nucleotide-binding protein HINT1. On top, we provide probes for MBLAC2, an off-target of every second (!) hydroxamic acid-based HDAC inhibitor! https://t.co/uuRCO78xFz 👇🧵" / X

Unifying the analysis of bottom-up proteomics data with CHIMERYS - Nature Methods

Gemcitabine and ATR inhibitors synergize to kill PDAC cells by blocking DNA damage response | Molecular Systems Biology

PTMNavigator: interactive visualization of differentially regulated post-translational modifications in cellular signaling pathways - Nature Communications

Towards routine proteome profiling of FFPE tissue: insights from a 1,220-case pan-cancer study | The EMBO Journal