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Katherine Xue

@ksxue.bsky.social
1.8K followers 1.1K following 30 posts

Assistant prof at UC Irvine. Ecology and evolution in microbial communities, and occasional writing. kxuelab.com

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Katherine Xue @ksxue.bsky.social · 26/05/2026
Do you love amplicon sequencing? Do you want to sequence MORE amplicons, faster and at lower cost? Check out 💘CUPID-seq💘, a highly multiplexed library design that lets you sequence hundreds of amplicon samples (16S, 18S, and more!) on a single sequencing run! (1/n) 🧵 www.biorxiv.org/content/10.6...
The CUPID-seq logo, which consists of a heart formed from two strands of DNA that then combine to produce an arrow.
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Katherine Xue @ksxue.bsky.social · 17/07/2025
The Xue lab at UC Irvine is looking for a staff scientist to support our work investigating how microbes interact and evolve in the gut microbiome! Open to a wide range of previous experience levels, see ad for more. recruit.ap.uci.edu/JPF09601
recruit.ap.uci.edu
Junior, Assistant, or Associate Specialist – Xue Lab
University of California, Irvine is hiring. Apply now!
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Katherine Xue @ksxue.bsky.social · 03/06/2025
Want to write to your community about the importance of science funding? Join me on zoom this Friday at 12pm ET / 9am PT to learn to write an op-ed as part of the #McClintockLetters initiative! Sign up to write a letter and register for the workshop here: blogs.cornell.edu/asap/events-...
A flyer with the heading McClintock Letter-Writing Workshop. Details are Friday, June 6th, 12pm ET and 9am PT, virtual.
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Katherine Xue @ksxue.bsky.social · 23/05/2025
Scientists, reach out to your local communities about the importance of funding science! Write an op-ed to your local newspaper as part of the #McClintockLetters. Please spread the word and sign up! DM me if you're interested and need help getting started. I'm trained as a writer and happy to help.
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Katherine Xue @ksxue.bsky.social · 08/04/2025
What a joy to read this beautifully written commentary on our community coalescence experiments! Thank you Alyssa Mitchell and @contaminatedsci.bsky.social for the insightful take and lovely graphical summary.
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Katherine Xue @ksxue.bsky.social · 15/03/2025
Microbial ecologists, do you ever want to quantify the stability of a community over time, or the amount of spatial heterogeneity across sites? Check out FAVA, developed by @maikemorrison.bsky.social. With FAVA, you can quantify compositional variability across many microbiome samples.
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Katherine Xue @ksxue.bsky.social · 11/03/2025
What happens if you introduce 🦠vs 🦠🦠🦠 into a microbial community? Are larger microbial populations more likely to establish? Check out new work led by @goldmandoran.bsky.social that used experiments and theory to dive deep into this simple question. ⬇️ www.pnas.org/doi/10.1073/...
pnas.org
Competition for shared resources increases dependence on initial population size during coalescence of gut microbial communities | PNAS
The long-term success of introduced populations depends on both their initial size and ability to compete against existing residents, but it remain...
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Katherine Xue @ksxue.bsky.social · 19/11/2024
Hi friends new and old! I study how microbes interact and evolve in complex communities like the human gut microbiome.🦠🧬💩 I'm thrilled to share that I'm starting a lab at UC Irvine in April 2025 and am recruiting at all levels - please spread the word! kxuelab.com More about my work below...🧵1/n
kxuelab.com
Xue lab at UC Irvine
Ecology and evolution in the human gut microbiome
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