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Jonas Paulsen

@jonnings.bsky.social
290 followers 181 following 2 posts

Bioinformatics, 3D genome, epigenetics, gene regulation, mechanobiology

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Reposted by Jonas Paulsen
Job Dekker @jobdekker.bsky.social · 17/12/2025
A major output of the 4D Nucleome project appeared today. This is the joint effort of many scientists working together and (publicly) sharing data and results for several years. We hope this is of interest to many genome biologists! www.nature.com/articles/s41...
nature.com
An integrated view of the structure and function of the human 4D nucleome - Nature
The 4D Nucleome Project demonstrates the use of genomic assays and computational methods to measure genome folding and then predict genomic structure from DNA sequence, facilitatin...
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Reposted by Jonas Paulsen
Juan Antonio Rodríguez @jrotwitguez.bsky.social · 22/11/2025
It was an amazing day-in-3D! Happy to have shar3D some insights on how to look at the genome from a different perspective 🧶🧬 (Thanks #MSCA @ec.europa.eu for funding through #POPARCH)
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Reposted by Jonas Paulsen
Anthony Mathelier @amathelier.bsky.social · 22/07/2025
🚨 We're hiring! NCMBM @ncmbm.bsky.social is looking for 2 new group leaders to join our vibrant research community. Ready to build your own group with strong support and a solid startup package? Interested and attending #ISMBECCB2025? Let’s connect! 🔗 www.jobbnorge.no/en/available...
jobbnorge.no
Group Leader (282908) | University of Oslo
Job title: Group Leader (282908), Employer: University of Oslo, Deadline: Monday, September 8, 2025
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Jonas Paulsen @jonnings.bsky.social · 01/07/2025
🧬 New in Bioinformatics! We’re excited to share StripePy - a Python application for fast, robust detection of architectural stripes in Hi-C & Micro-C data. 🔗 Read the paper 👉 doi.org/10.1093/bioi... #3DGenomics #Bioinformatics #HiC #cool #hic @robomics.bsky.social @rea191.bsky.social
doi.org
StripePy: fast and robust characterization of architectural stripes
AbstractMotivation. Architectural stripes in Hi-C and related data are crucial for gene regulation, development, and DNA repair. Despite their importance,
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Reposted by Jonas Paulsen
Anthony Mathelier @amathelier.bsky.social · 04/02/2025
🚨 PhD in Bioinformatics & Gene Regulation 🚨 Join the Bioinformatics in Life Science (BiLS) initiative through a multidisciplinary project to unravel gene regulation from DNA to proteins, co-supervised by E. Valen @jonnings.bsky.social and me! www.jobbnorge.no/en/available...
jobbnorge.no
PhD Research Fellow in Bioinformatics and Gene Regulation (274506) | University of Oslo
Job title: PhD Research Fellow in Bioinformatics and Gene Regulation (274506), Employer: University of Oslo, Deadline: Friday, February 28, 2025
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