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Jean-Baptiste Lugagne

@jblugagne.bsky.social
139 followers 196 following 3 posts

Associate Professor at Oxford - Interfacing Cells & Machines 🦠🔁💻 jblugagne.gitlab.io

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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 09/09/2026
⏰ Last day to register for Biological Control Systems 2026! Join us in Oxford next week for two days of talks, posters and discussion at the intersection of synthetic biology, control, AI and automation. Programme & registration: biocontrolseminars.org/biocontrol26
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 24/08/2026
🎓 Tomorrow, Tuesday 25th August at 11AM ET / 5PM CET, Carlos Floyd from the University of Chicago will present "How biological systems can achieve control without global information" More information and zoom link at biocontrolseminars.org
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 07/07/2026
🕙 8 days until early-bird deadline for #Biocontrol26 biocontrolseminars.org/biocontrol26 Highlighting our speaker Prof Lucia Marucci from Bristol. Her work uses control, synbio & comp sci, with applications from synthetic controllers for cell functions to whole-cell design & predictable DBTL cycles
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 06/07/2026
🕙 9 days until the early-bird deadline for #Biocontrol26 Thrilled to highlight one of our speakers: Dr @noaholsman.bsky.social Noah brings together control, dynamical systems, and synbio to understand how feedback shapes robustness in biomolecular circuits. biocontrolseminars.org/biocontrol26
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 30/06/2026
🦠🎓 We had a great time organizing our first summer school on Biological Control Systems at Oxford! Thank you to all the participants for a very enjoyable and stimulating week of discussions on the state of the art and future challenges in controlling biological systems across modalities and scales.
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 28/06/2026
This Tuesday, June 30th at 8am PT / 11am ET / 5pm CET, join us for our online Biological Control Systems Seminar: Laurie Josselin from Liège University will present: "What we observe, what we control: microbial cell population dynamics in continuous bioreactors" More info: biocontrolseminars.org
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Reposted by Jean-Baptiste Lugagne
Ross D. Jones, PhD @jonesr18.bsky.social · 22/05/2026
Our next @bioctrl.bsky.social Seminar is Tuesday (May 26th) at 8am PT / 11am ET / 5pm CET! Kshitij Rai from UW and Ronan O'Connell from Baylor University will present Join us online: mit.zoom.us/j/9432532792...
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Reposted by Jean-Baptiste Lugagne
Ross D. Jones, PhD @jonesr18.bsky.social · 07/05/2026
The abstract submission deadline for Biocontrol26 is coming up Friday May 15th! @bioctrl.bsky.social 🦠🎮 If you are interested in giving a talk or presenting a poster in September at Oxford, you can submit an abstract and see more information on our website: biocontrolseminars.org/biocontrol26
Biocontrol26 Flyer with registration info: www.biocontrolseminars.org/biocontrol26
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 07/05/2026
Come join us in Oxford in September! Abstract submissions closing May 15th
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 30/03/2026
Join us online tomorrow Tuesday March 31 at 11am ET (5pm CET). Jake McGrath from UT Austin will present "Using control theory to study biology: a case study on muscle function and evolution" More information at biocontrolseminars.org
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Reposted by Jean-Baptiste Lugagne
Ross D. Jones, PhD @jonesr18.bsky.social · 27/03/2026
Like many labs, we have a Slack #papers channel for sharing and discussing cool work. For a while we talked about auto-linking to Zotero so we can collect all the papers into a shared repository. With help from @anthropic.com's Claude, I set this up in less than a day github.com/jonesr18/sla...
github.com
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 26/03/2026
📣 Delighted to announce Biological Control Systems 2026, held in-person in Oxford (14-15 Sept) 📣 This event brings together a broad community across synbio, control, and AI/ML. We welcome contributions from theory to experiments. Abstracts + registration open: biocontrolseminars.org/biocontrol26
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 17/11/2025
🖥️🌐Don't miss our online Workshop coming up this Wednesday, Nov 19. Lots of exciting talks, posters, and discussions across timezones! Check out the full programme at: biocontrolseminars.org/workshop-2025
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Reposted by Jean-Baptiste Lugagne
Ningaloo Biosystems @ningaloobio.bsky.social · 14/11/2025
Join us at the 2nd Workshop on Biological Control Systems by @bioctrl.bsky.social . On Nov 19 at 3 PM CET, Dr. Schmidt and Dr. Gebel will present Ningaloo’s work on optogenetic control in biomanufacturing and its role in cyber-bioproduction. 📝Register: lnkd.in/enrHdv_m #optogenetics #synbiology
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 07/11/2025
📢 The full programme for the 2nd Workshop on Biological Control Systems (WBCS 2025) is out! 🗓️ 19 Nov 2025 | Online across time zones 🔗 Programme & info: biocontrolseminars.org/workshop-2025
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 27/10/2025
Join us online tomorrow, Tuesday Oct 27 at 11am ET / 4pm CET. Tuan Pham from the University of Amsterdam will present his work on "Adaptation under Dynamic Genotype-Phenotype Map as Out-of-Equilibrium Learning". More information at biocontrolseminars.org
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 29/09/2025
💻 Join us online, tomorrow Tuesday 30th September at 11am ET / 5pm CET for Eugenio Cinquemani's talk "Single-cell data reveal heterogeneity of investment in ribosomes across a bacterial population". As always more information on our website: biocontrolseminars.org
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Joel Lüthi @joelluethi.bsky.social · 25/08/2025
We're happy to announce the 2025 International OME-NGFF workshop 🎉 📅 Dates: - Symposium: Nov 10–11, 2025 - Hackathon: Nov 12–14, 2025 📍 Location: Zurich, Switzerland Full details & registration: www.biovisioncenter.uzh.ch/en/events/Up...  #bioimaging #openscience #OMENGFF #OMEZarr (1/x 🧵)
Visual of segmented human induced pluripotent stem cells with the key workshop dates: Symposium on November 10-11, Hackathon on November 12-14th in Zurich Switzerland
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Biocontrol Seminars @bioctrl.bsky.social · 25/08/2025
📢Join us for our online seminar tomorrow Tuesday Aug 26 at 11am ET (5pm CET) Frank Britto Bisso from Carnegie Mellon University will present "Programming genetic circuits that operate as neural networks" As always more information on our website biocontrolseminars.org
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Jean-Baptiste Lugagne @jblugagne.bsky.social · 28/07/2025
🐬⚔️ Excited for this talk tomorrow! Daniel will present the MARLIN method: 1M mother machine microfluidic chip, with in situ phenotype-to-genotype linking. Come join us on zoom, see biocontrolseminars.org
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 18/06/2025
📢 The second edition of our Workshop on Biological Control Systems is happening online on 19 Nov 2025, with sessions across Asia, Europe, and the Americas. 📢 Talks & posters abstract submissions: Aug 1 & Aug 15 Keynotes and more info on our website: www.biocontrolseminars.org/workshop-2025
biocontrolseminars.org
Biocontrol Seminars - Workshop 2025
The Second Edition of our Workshop on Biological Control Systems will be held on November 19, 2025
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 27/05/2025
Join us online today Tue 27 May, as Maren Phillips from the University of Bonn presents "Hybrid neural and mechanistic ODEs for systems biology" at 5:00 pm CEST / 11 am EDT / 8 am PDT! As always more information at biocontrolseminars.org
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 28/04/2025
Join us tomorrow, Tuesday April 29th at 11am ET, for our monthly seminar! Sebastian Castillo-Hair from UW will present "Generalizable design of human tissue, cell type, and cell state-specific gene expression via deep learning models of genomic accessibility" More info at biocontrolseminars.org
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Reposted by Jean-Baptiste Lugagne
Josiah Passmore @jpassmore.bsky.social · 24/03/2025
Join the biocontrol seminar tomorrow to hear about the fun things we are doing with controlling cells!
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Biocontrol Seminars @bioctrl.bsky.social · 24/03/2025
Tomorrow, Tuesday March 25th at 11am ET, @jpassmore.bsky.social from Utrecht University, The Netherlands, will present "Outcome-driven microscopy: integrating smart microscopy and optogenetics for precise biological control"! Join us on Zoom, more information on biocontrolseminars.org
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 24/02/2025
Tomorrow, Tuesday Feb 25th at 9am ET, Takehiro Tottori from RIKEN, Japan, will present "Theory for Optimal Estimation and Control under Resource Limitations and Its Applications to Biological Information Processing and Decision-Making"! More information on biocontrolseminars.org
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Reposted by Jean-Baptiste Lugagne
Erik van Nimwegen @erikvannimwegen.bsky.social · 15/01/2025
What do bacterial cells do when they run out of nutrients? Although most bacterial studies focus on cells in exponentially growing states, in the wild bacteria likely spend most of their time slowly starving to death. 1/n www.biorxiv.org/content/10.1...
biorxiv.org
E. coli prepares for starvation by dramatically remodeling its proteome in the first hours after loss of nutrients
It is widely believed that due to nutrient limitations in natural environments, bacteria spend most of their life in non-growing states. However, very little is known about how bacteria change their p...
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Reposted by Jean-Baptiste Lugagne
Biocontrol Seminars @bioctrl.bsky.social · 10/12/2024
Join us for our last seminar of the year! Today, Dec 10th at 11am ET, Fengjie Zhao from University of Southern California will present "Control of extracellular electron transfer in phylogenetically diverse electroactive bacteria" As always more information at biocontrolseminars.org
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