IntFOLD @intfold.bsky.social · 05/09/2025Our paper on the performance of ModFOLDdock2 at #CASP16 onlinelibrary.wiley.com/doi/10.1002/...onlinelibrary.wiley.comHighlights of Model Quality Assessment in CASP16Model quality assessment (MQA) remains a critical component of structural bioinformatics for both structure predictors and experimentalists seeking to use predictions for downstream applications. In ... 021
IntFOLD @intfold.bsky.social · 05/08/2025We used IntFOLD, and MultiFOLD to model interactions between Cx62 and calpain-1: "Inter-platelet communication driving thrombus formation is regulated by extracellular calpain-1 cleavage of connexin 62" | Haematologica haematologica.org/article/view...haematologica.org Inter-platelet communication driving thrombus formation is regulated by extracellular calpain-1 cleavage of connexin 62 | Haematologica 011
IntFOLD @intfold.bsky.social · 09/07/2025Our new paper has been published: Prediction and quality assessment of protein quaternary structure models using the MultiFOLD2 and ModFOLDdock2 servers url: academic.oup.com/nar/article/...academic.oup.comPrediction and quality assessment of protein quaternary structure models using the MultiFOLD2 and ModFOLDdock2 serversAbstract. Understanding the structures of protein complexes is pivotal for breakthroughs in health, agriculture, bioengineering, and beyond. MultiFOLD2 and 041
IntFOLD @intfold.bsky.social · 28/04/2025Our new paper is out: Prediction and quality assessment of protein quaternary structure models using the MultiFOLD2 and ModFOLDdock2 servers academic.oup.com/nar/advance-...academic.oup.comPrediction and quality assessment of protein quaternary structure models using the MultiFOLD2 and ModFOLDdock2 serversAbstract. Understanding the structures of protein complexes is pivotal for breakthroughs in health, agriculture, bioengineering, and beyond. MultiFOLD2 and 032
Reposted by IntFOLDKirk @kirk-taylor.bsky.social · 07/03/2025Pleased to share that our latest study has been published in Hematologica! @rdgplateletlabs.bsky.social pubmed.ncbi.nlm.nih.gov/40045892/pubmed.ncbi.nlm.nih.govInter-platelet communication driving thrombus formation is regulated by extracellular calpain-1 cleavage of connexin 62 - PubMedConnexin (Cx) gap junction proteins are expressed by a multitude of cells and function as plasma membrane hemichannels or dock to form intercellular communication tunnels. Whilst Cx43 has garnered con... 0115
IntFOLD @intfold.bsky.social · 18/02/2025The main link for IntFOLD server: reading.ac.uk/bioinf/IntFO...reading.ac.ukBioinformatics Web Servers - University of Reading 000
Reposted by IntFOLDLiam McGuffin @liammcguffin.bsky.social · 03/12/2024Yesterday at #CASP16 I presented our new ModFOLDdock2 servers for the quality assessment of multimer models. It's great to see progress in the field but there are still many challenges ahead! 032
Reposted by IntFOLDLiam McGuffin @liammcguffin.bsky.social · 03/12/2024My group members, Shaima and @recep44.bsky.social, presented their posters on MultiFOLD2 for multimer modelling and FunFOLD5 for predicting protein-ligand interactions at #CASP16. Lots of interest and positive feedback! 073
Reposted by IntFOLDLiam McGuffin @liammcguffin.bsky.social · 03/12/2024ModFOLDdock2 is the top ranked method for predicting the interface accuracy of modelled protein complexes #CASP16. The server is available here: www.reading.ac.uk/bioinf/ModFO... 1124
Reposted by IntFOLDLiam McGuffin @liammcguffin.bsky.social · 11/12/2024The ModFOLDdock2 server is now online and freely available to all. The ModFOLDdock2 variants ranked within the top few groups at #CASP16 in QMODE1/2 metrics. ModFOLDdock2 is the best method for predicting the interface accuracy of modelled protein complexes. www.reading.ac.uk/bioinf/ModFO... 131
Reposted by IntFOLDLiam McGuffin @liammcguffin.bsky.social · 12/12/2024Our MultiFOLD2 server is also now freely available to all. It's the top-ranked server on the hardest domain targets in #CASP16 by GDT_TS. With integrated stoichiometry prediction it outperforms AF3 on common multimer subsets in CAMEO. www.reading.ac.uk/bioinf/Multi... 1126