Inside Boltz, AlphaFold’s Legacy, and the Tools Powering Next-Gen Molecular Discovery

At MiraOmics we look at a lot of H5AD files. We have a database of over a thousand of them, not to mention several of the public data sources. Pretty much every time I have a new file, the first thin...

A Python library and CLI tool for extracting metadata from AnnData .h5ad files, both locally and on S3 - honicky/anndata-metadata

Better Gene Embeddings Through Prompt Engineering (Or, at Least, We Tried)

In the spirit of “Learning in Public,” and “learning exhaust,” I’m going to start adding “Lab Notes” blog posts that chronicle little discoveries or failures that I have along the way to a larger goal...

Why you have to manage data products differently than software and hardware.

I wonder why it isn't a thing...

Modern training techniques for embedding models mean that we should probably include a prompt or fine tune to a specific type of task.