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Exploring Brain Mechanics

@ebmresearch.bsky.social
113 followers 31 following 201 posts

Official account of the Collaborative Research Center (CRC 1540) Exploring Brain 🧠 Mechanics funded by @dfgpublic.bsky.social @fau.de Charité Berlin Universität Bonn MPI Light Homepage: www.crc1540-ebm.research.fau.eu

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Exploring Brain Mechanics @ebmresearch.bsky.social · 02/10/2026
Curious? Watch the full EBM image film now on our website or under player.vimeo.com/video/118692...
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EBM Imagefilm on Vimeo
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Exploring Brain Mechanics @ebmresearch.bsky.social · 02/10/2026
Our new EBM image film takes you behind the scences of CRC 1540 Exploring Brain Mechanics and introduces the ideas, people, and interdisciplinary research behind our work.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 02/10/2026
🧠🎥 Discover Exploring Brain Mechanics! What is EBM about? How do mechanics shape the brain, and what happens when these processes are altered?
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Exploring Brain Mechanics @ebmresearch.bsky.social · 25/09/2026
The seminar once highlighted the interdisciplinary research within EBM and sparked discussions across projects and research fields!
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Exploring Brain Mechanics @ebmresearch.bsky.social · 25/09/2026
Michael Tranchina (A04) shared his work on how mechanics shape neural lineage decisions, highlighting the complex interplay of mechanical factors during brain development and the potential of brain organoids as advanced model systems.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 25/09/2026
Shanice Heidenreich (C04) presented her research on cellular differentiation in brain tissue-like matrices, exploring how properties such as stiffness and plasticity influence cellular behavior.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 25/09/2026
🧠🔬 Exploring the role of mechanics in brain development! On July, 23, EBM (post)doctoral researchers came together for the latest Doctoral Researchers' Seminar at the Institute of Biochemistry.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 18/09/2026
👨‍🔬👩‍🔬 Oskar Neumann, Rahul Gopalan Ramachandran, Harsh Vardhan Surana, Friedrich Paulsen, Michael Scholz, Simone Gaffling, Paul Steinmann, Silvia Budday #Biomechanics #SpinalCord #TissueMechanics #FiniteElementMethod #ContinuumMechanics #ComputationalModeling #Mechanobiology
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Exploring Brain Mechanics @ebmresearch.bsky.social · 18/09/2026
This provides an experimental and computational basis for future simulations of spinal cord injury, remodeling and regeneration. 🔗 doi.org/10.1016/j.ac...
doi.org
Redirecting
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Exploring Brain Mechanics @ebmresearch.bsky.social · 18/09/2026
The combined pipeline also allowed us to identify more robust material parameters by integrating indentation and rheometer data rather than relying on a single testing modality.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 18/09/2026
A key result is that Ogden-type models captured the nonlinear material response better than simpler Hertzian or neo-Hookean descriptions.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 18/09/2026
By applying both testing modalities sequentially to the same samples, we were able to compare local, tissue-type-specific indentation data with global, whole-sample large-strain behavior.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 18/09/2026
The approach combines: 🔬 spherical indentation of gray and white matter ⚙️ large-strain compression–tension testing with a rheometer 🧮 nonlinear continuum mechanics 💻 inverse finite element simulations
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Exploring Brain Mechanics @ebmresearch.bsky.social · 18/09/2026
In our recent study, we developed a multimodal mechanical characterization pipeline for porcine spinal cord tissue.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 18/09/2026
⚙️𝗟𝗶𝗻𝗸𝗶𝗻𝗴 𝗹𝗼𝗰𝗮𝗹 𝗮𝗻𝗱 𝗴𝗹𝗼𝗯𝗮𝗹 𝘀𝗽𝗶𝗻𝗮𝗹 𝗰𝗼𝗿𝗱 𝘁𝗶𝘀𝘀𝘂𝗲 𝗺𝗲𝗰𝗵𝗮𝗻𝗶𝗰𝘀 Spinal cord tissue is ultrasoft, structurally complex and difficult to characterize mechanically. This creates a major challenge for computational models of spinal cord injury, disease and regeneration: which material parameters should be used?
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Exploring Brain Mechanics @ebmresearch.bsky.social · 03/09/2026
Beyond scientific exchange, the meeting will provide an opportunity to acknowledge Jochen Guck's scientific impact he had on shaping the research community. More information ➡️ mpzpm.mpg.de/news/events/...
mpzpm.mpg.de
Event Details
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Exploring Brain Mechanics @ebmresearch.bsky.social · 03/09/2026
The symposium will explore current developments and future directions in cell physics, with a particular focus on how chemical signals, mechanical forces, and spatial cues interact across scales - from molecules and cells to tissues.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 03/09/2026
On September 21-22. 2026, colleagues, collaborators, and friends across the field of cell physics will come together at the Max-Planck-Zentrum für Physik und Medizin (MPZPM) in Erlangen for the symposium "How Do You Feel", held in memory of Prof. Dr. Jochen Guck.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 03/09/2026
How Do You Feel - Symposium in Memory of Jochen Guck
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Exploring Brain Mechanics @ebmresearch.bsky.social · 07/08/2026
A great collaboration across projects! Full report on our website: www.crc1540-ebm.research.fau.eu/2026/05/19/h... Photos: W. Yibulayin, M.Tranchina
crc1540-ebm.research.fau.eu
Lab Shadowing: How mechanics shape developing human brain organoids
In April, a Lab Shadowing brought together Michael Tranchina, Sebastián Vásquez Sepúlveda, and Maria Tarczewska (Projects A04, A05, and B02) to explore how mechanical cues influence the development of...
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Exploring Brain Mechanics @ebmresearch.bsky.social · 07/08/2026
🧠🔬How do mechanical environments influence developing human brain organoids? During a recent EBM lab shadowing, researchers from A04, A05, and B02 combined hydrogels, organoids, and AFM measurements to study compartment-specific tissue mechanics during early neural development.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 31/07/2026
This is part of EBM’s Y Project, which aims to establish MRE at FAU for the non-invasive assessment of the in vivo brain’s mechanical properties.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 31/07/2026
Shear wave speed images acquired on the Institute’s new 3-T Cima.X scanner, following successful implementation of magnetic resonance elastography (MRE) on 3-T Vida, and former 3-T Prisma systems.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 24/07/2026
After months of preparation, our team presented EBM's research, vision, and collaborative spirit. A huge thank you to everyone who made these two days possible - we're proud of this team effort and now look forward to the funding decision! 🤞
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Exploring Brain Mechanics @ebmresearch.bsky.social · 24/07/2026
Intense days for EBM! CRC 1540 Exploring Brain Mechanics welcomed the DFG review panel to FAU for the on-site evaluation of our proposal for a second funding period.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 17/07/2026
Organanized by Silvia Budday (FAU Erlangen-Nürnberg), Gerhard Holzapfel (TU Graz), and Paul Steinmann (FAU Erlangen-Nürnberg). We look forward to inspiring discussions and to connecting with the brain mechanics community in Munich! #WCCM2026 #ECCOMAS2026
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Exploring Brain Mechanics @ebmresearch.bsky.social · 17/07/2026
🧠🌎 Join us at WCCM-ECCOMAS 2026! We're excited to announce the minisymposium MS032 - Exploring Brain Mechanics 📅 July 19-24, 2026 📍ICM - International Congress Center Messe München
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Exploring Brain Mechanics @ebmresearch.bsky.social · 26/06/2026
Full report on our website: www.crc1540-ebm.research.fau.eu/2026/06/02/d... Photos: E. Cecchini, S. Firooz
crc1540-ebm.research.fau.eu
Doctoral Researchers‘ Seminar by Erica Cecchini (A02) and Soheil Firooz (C01)
On May 20, 2026, Erica Cecchini and Soheil Firooz jointly held a doctoral seminar at the MPZPM in Erlangen, providing an opportunity to present and discuss their ongoing doctoral research projects.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 26/06/2026
Soheil Firooz (C01) introduced the Double-Agent Framework, a novel computational approach to model neural network formation by combining agent-based modeling and continuum mechanics. A great example of the interdisciplinary research and exchange within EBM! 🔬✨
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Exploring Brain Mechanics @ebmresearch.bsky.social · 26/06/2026
Erica Cecchini (A02) presented findings from her recent MOGHE study, revealing the unexpected presence of Y-chromosomal material in lesion tissue—including in some female patients.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 26/06/2026
🧠 Insights from our EBM (Post-)Doctoral Researchers’ Seminar!
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Exploring Brain Mechanics @ebmresearch.bsky.social · 18/06/2026
A great opportunity to build confidence and sharpen presentation skills! Full report: www.crc1540-ebm.research.fau.eu/2026/05/07/p... Photos: S. Hülsenbeck, A. Dakkouri-Baldauf
crc1540-ebm.research.fau.eu
From Raw Talks to Better Presentations
As early career researchers, we often focus so much on our data that we forget how we actually present it. We (Guillaume, Irem, and Lucas) recently attended a Presentation Workshop that was extremely…
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Exploring Brain Mechanics @ebmresearch.bsky.social · 18/06/2026
🎤✨ Learning how to communicate science effectively! At the workshop “How to Pitch Your Project” with Dr. Stefanie Hülsenbeck, EBM early-career researchers practiced presenting without slides, received individual feedback, and gained valuable insights into effective scientific communication.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 12/06/2026
A special highlight: a browser-based epigenomics analysis tool currently under development, designed to make omics analysis more accessible for students. Full report @ www.crc1540-ebm.research.fau.eu/2026/05/05/5... Photos: Erica Cecchini
crc1540-ebm.research.fau.eu
From Molecules to Matrices – Inside the EBM Harmonization Workshop
How do you explain the complexities of molecular biology to an audience of physicists, engineers, and materials scientists? That was the goal of PD Dr. rer. nat. Dr. habil. med. Katja Kobow…
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Exploring Brain Mechanics @ebmresearch.bsky.social · 12/06/2026
🧬🧠 Multi-omics, molecular biology & computational workflows - all in one workshop! At the latest EBM Harmonization Workshop, Katja Kobow and Paraskevi Chasani introduced EBM researchers to modern approaches for analyzing and integrating complex biological data.
crc1540-ebm.research.fau.eu
From Molecules to Matrices – Inside the EBM Harmonization Workshop
How do you explain the complexities of molecular biology to an audience of physicists, engineers, and materials scientists? That was the goal of PD Dr. rer. nat. Dr. habil. med. Katja Kobow…
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Exploring Brain Mechanics @ebmresearch.bsky.social · 08/06/2026
A powerful example of how science can be experienced in new ways ✨ Photos: Andrea Dakkouri-Baldauf, Kloster Speinshart
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Exploring Brain Mechanics @ebmresearch.bsky.social · 08/06/2026
🎶🧠 Science meets music meets baroque architecture! “Das Gehirn – Musikalische Erkundungen” transformed the monastery church in Speinshart into an immersive journey through the human brain — with organ music, live science talks & stunning visualizations.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 29/05/2026
Read about the promising results here: doi.org/10.1007/s102...
doi.org
Mechanical characterization of human versus porcine brain tissue under large strains - Biomechanics and Modeling in Mechanobiology
Due to the limited availability of human body donor brains, biomechanical testing for material parameter identification is often done on animal tissue. So far, only one study has compared human and animal brain tissue under indentation, which provides data for the small strain regime and hence is not applicable to large-strain scenarios like surgery. Here, we compare the large-strain behavior of human and porcine brain tissue from four anatomical regions (corona radiata, putamen, cerebellar white matter, and brain stem) under compression, tension, and shear. Our results from cyclic loading tests show that samples from the cerebral white matter behave similarly for both species under all loading modes, whereas samples from the cerebellar white matter are similar only under compression-tension, but not shear loading. For regions with mixed gray and white matter, we observe a softer behavior for porcine samples under all loading modes. The stress relaxation behavior is similar in both species, except for samples from the putamen. These findings indicate that porcine brain tissue can be used as an alternative for human tissue to study general tissue mechanics. However, since the porcine brain is much smaller and therefore, less brain regions can be characterized mechanically, human brain data are still needed to calibrate full brain simulation models.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 29/05/2026
Another exciting open-access #EBM publication! This study explores the mechanical behavior of human and porcine brain tissue, investigating whether porcine tissue could serve as a surrogate for the often difficult-to-obtain human brain tissue.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 22/05/2026
This will be achieved by combining oxidized polysaccharides, particularly hyaluronic acid, with proteins and extracellular matrix components to modify the material’s physico-chemical properties and provide biochemical functionalities.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 22/05/2026
X03 aims to engineer artificial brain extracellular matrix (ECM) mimicking tissue using hydrogel-based substitute materials with mechanical properties similar to specific regions of native brain tissue.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 15/05/2026
Photos: Markus Lorke
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Exploring Brain Mechanics @ebmresearch.bsky.social · 15/05/2026
🌎🔬 Research exchange at UT Austin! Markus Lorke (X03) worked on neural stem cell culture, hydrogel design & FRAP characterization - with promising results for future experiments in Erlangen. A great step toward stronger collaboration between FAU, UT Austin and the EBM network!
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Exploring Brain Mechanics @ebmresearch.bsky.social · 08/05/2026
As well as this exciting News & Views Article by Victor Borrell and Mireia Pampols-Perez showcasing the fascinating findings of the paper: link.springer.com/article/10.1...
link.springer.com
Neural stem cell fate: a tango of mechanics and genetics - EMBO Reports
EMBO Reports - Our body is shaped during development under the control of genetic programs, but also under the influence of mechanical forces. Tissue growth and form is limited, biased and even...
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Exploring Brain Mechanics @ebmresearch.bsky.social · 08/05/2026
Follow this link to read the paper: link.springer.com/article/10.1...
link.springer.com
Mechanical impact on neural stem cell lineage decisions in human brain organoids - EMBO Reports
During neurodevelopment neural stem cells give rise to a spatially patterned tissue in which a regionally differentially regulated balance between proliferation and differentiation produces the fine-t...
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Exploring Brain Mechanics @ebmresearch.bsky.social · 08/05/2026
Excited to share our new #EBM paper: Acute mechanical manipulations and persistent changes in the mechanical environment of human brain organoids direct neural stem cell lineage decisions by shaping early patterning programs and cell-type-specific metabolism.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 24/04/2026
Goal: develop a continuum-based model that unifies different experimental observations using advanced simulations/validations of experimental data from phantoms, animal brain tissue samples, in vivo mouse and human brains to predict disease-induced changes in cerebral (poro-)visco-elastic properties
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Exploring Brain Mechanics @ebmresearch.bsky.social · 24/04/2026
X01 addresses the problem of inconsistent results on the mechanical properties of ultrasoft materials such as brain tissue by reconciling data from different ex vivo and in vivo testing techniques, including MRI, MRE, vibration tests, rheometry, indentation, and AFM.
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Exploring Brain Mechanics @ebmresearch.bsky.social · 17/04/2026
Sebastián (A05) introduced his work on the mechanical role of Slc35a2 using Xenopus tadpoles, with a focus on the human malformation MOGHE. The seminar sparked engaging discussions and opened up perspectives for future collaborations across projects!
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Exploring Brain Mechanics @ebmresearch.bsky.social · 17/04/2026
Sophia (A02) presented her research on ECM-related changes in epileptic brain malformations, highlighting the role of perineuronal nets. She also shared insights from proteomic profiling of human tissue in temporal lobe epilepsy.
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