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Dr. Ari Kozik

@drkozik.bsky.social
6.5K followers 1.5K following 107 posts

Scientist. Prevotella Host-Microbe Interactions. Airway Microbiome. Multi-omics. Asst. Prof @ UMich. PI of @koziklab Nerd. sites.lsa.umich.edu/koziklab

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Reposted by Dr. Ari Kozik
ATS Assemblies @ats-assemblies.bsky.social · 07/09/2026
Happy Labor Day from the ATS! Today, we honor the contributions of workers from across the United States, including those that help the world breathe better. All ATS offices are closed in honor of this federal holiday.
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Reposted by Dr. Ari Kozik
Working Families Party 🐺 @workingfamilies.org · 07/09/2026
It's Labor Day. A day born out of a working class uprising that helped shift working conditions. Here's the story of how it began, and how it matters today:
Labor day march, 1934. Photo cred: Bettmann/Getty.
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Dr. Ari Kozik @drkozik.bsky.social · 06/09/2026
Grocery prices are insane.
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Reposted by Dr. Ari Kozik
DEI Virologist @kyt-thatsme.bsky.social · 05/09/2026
Hey everybody, Niq is a friend of mine who is in need. If you have anything to give, please consider helping out! We can prevent a family from suffering in the heat and going hungry. Any amount counts.
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Reposted by Dr. Ari Kozik
Futurum Careers @futurumcareers.bsky.social · 01/09/2026
In our latest collection of free education resources, we explore microbiology with @drkozik.bsky.social from @umich.edu. These inspiring resources explore her research and she shares her advice for anyone interested in working in this field. futurumcareers.com/how-does-the...
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Futurum Careers @futurumcareers.bsky.social · 01/09/2026
Your mouth, lungs and airways are home to billions of bacteria and other microbes that make up your respiratory tract microbiome. @drkozik.bsky.social from @umich.edu studies the bacteria living in our airways to learn more about how they influence our health. futurumcareers.com/how-does-the...
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Animalcules @bacteriophile.bsky.social · 18/07/2026
#microsky
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Dr. Ari Kozik @drkozik.bsky.social · 18/07/2026
Congratulations to Souzane from my lab, and my postdoc Dr. De'Jana Parker (who is about to start her own lab @detroitmercy.bsky.social !!) on their work here, tracking publications on these bacteria through several name changes! #koziklab #PrevotellaLab
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Dr. Ari Kozik @drkozik.bsky.social · 18/07/2026
With Prevotella recently split into many new genera (over 55 species down to ~21!), what's left? Our new review explores the remaining mucosal species, with a particular focus implications for the human oral, airway, and vaginal niches. 🧪 Journal of Bacteriology journals.asm.org/doi/10.1128/...
journals.asm.org
The redefined identity of Prevotella: new implications for oral, respiratory, and vaginal health | Journal of Bacteriology
Over a century ago, Dr. William Wherry and his student, Wade Oliver, reported the isolation of a bacterium they called Bacterium melaninogenicus (1). This organism was described as a pigmented, Gram-negative, strictly anaerobic organism found frequently in the human mouth on carious teeth, but also recovered from the throat, tonsils, genitalia, and wound abscesses. Later classified under the genus Bacteroides, these and related organisms were frequently described as difficult to grow and maintain in pure culture, with biochemical assays yielding inconsistent fermentation and proteolytic profiles (2, 3). In 1947, Schwabacher, Lucas, and Rimington found that the characteristic pigments were not composed of melanin, as the name suggests, but rather hematin (4). In the 1960s, others showed that some strains required both hemin and vitamin K/vitamin K derivatives for growth (5). Consequently, as similar organisms were isolated from human oral and mucosal sites in the following decades, Shah and Collins proposed the reclassification of several species into their own genus, Prevotella, in 1990. Shah and Collins had previously argued that Bacteroides contained considerable heterogeneity, particularly with regard to fermentative capacity. They suggested that inclusion in Bacteroides should be limited only to highly fermentative species phenotypically similar to B. fragilis. The “nonsaccharolytic Bacteroides” were reclassified into the genus Porphyromonas, while the remaining 15 “moderately saccharolytic Bacteriodes” became Prevotella. Using a combination of biochemical and 16S rRNA-based analyses, they described Prevotella as organisms that may or may not produce pigment, are sensitive to bile salts, are moderately saccharolytic, and lack both glucose 6-phosphate dehydrogenase (G6PDH) and 6-phosphogluconate dehydrogenase (6PGDH) (6).
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Dr. Ari Kozik @drkozik.bsky.social · 18/07/2026
...than previously appreciated! Shoutout to @clairealbright.bsky.social, who led this project and is now doing exciting work to understand how these capabilities work. We are excited to see how this helps us to better understand the microbes in our airways! #koziklab #respiratorymicrobiome
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Dr. Ari Kozik @drkozik.bsky.social · 18/07/2026
🧪 Excited to finally share the published version of our work showing that P. melaninogenica (affectionately called 'P. mel' in my lab) has more superpowers... Aerotolerant capacity of the lung symbiont Prevotella melaninogenica | Journal of Bacteriology journals.asm.org/doi/10.1128/...
journals.asm.org
Aerotolerant capacity of the lung symbiont Prevotella melaninogenica | Journal of Bacteriology
This study provides a correction to the 100-year-old classification of Prevotella melaninogenica as a strict obligate anaerobe. We demonstrate that this key member of the human microbiome is capable o...
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Dr. Ari Kozik @drkozik.bsky.social · 10/06/2026
Returned safely from my first ASM as a lab group! We had five posters and my students did a great job with their presentations! Special shoutout to @clairealbright.bsky.social whose manuscript was accepted right before we arrived! 🧪
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Claire E Albright @clairealbright.bsky.social · 29/03/2026
Thank you to MI ASM for giving me the opportunity to present my research in an oral talk this weekend! Further thanks to the committee for awarding me 2nd place in the oral talk competition☺️ The research presented can be found here: www.biorxiv.org/content/10.6... #ASM #prevotella #microbiome
Image of me presenting
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Dr. Ari Kozik @drkozik.bsky.social · 07/06/2026
❤️❤️🧫🧬🌱🥦 it was so good to see you!!
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Reposted by Dr. Ari Kozik
Dr. Michael D. L. Johnson @copperbae.bsky.social · 04/06/2026
What’s good ASM MICROBE!
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Dr. Ari Kozik @drkozik.bsky.social · 06/06/2026
Loved connecting with you yesterday!!
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Dr. Ari Kozik @drkozik.bsky.social · 26/01/2026
AHHHHHH CONGRATULATIONSSSSS!!!!! ☺️
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Dr. Ari Kozik @drkozik.bsky.social · 25/01/2026
Sending you a message!
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Dr. Ari Kozik @drkozik.bsky.social · 25/01/2026
Thank you! Yes, we are working on that now. Hoping to recapitulate physiological conditions as close as we can so that we can really assess the interactions under those conditions.
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Dr. Ari Kozik @drkozik.bsky.social · 25/01/2026
Thank you!
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Dr. Ari Kozik @drkozik.bsky.social · 24/01/2026
In the oxygen exposed cells, but it doesn’t have the whole chain like we’d expect in facultative bacteria. It seems like there’s an undisclosed third option at play.
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Dr. Ari Kozik @drkozik.bsky.social · 24/01/2026
To be determined. Based on our experiments here, it is “consuming” the oxygen, but whether that is for energetic benefit or just neutralizing it in someway is what we are working on now. We found expression of *components* of the canonical electron transport chain
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Dr. Ari Kozik @drkozik.bsky.social · 24/01/2026
& interacts in the lungs, and what that means for us in both health and in disease. 🧬🔬 Stay tuned! Shoutout to my incredible trainees, especially @clairealbright.bsky.social,who took the lead on this project when it was just one of my crazy ideas & hit the ground running 🏃‍♀️💨 #MicroSky /fin
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Dr. Ari Kozik @drkozik.bsky.social · 24/01/2026
This discovery doesn't just change a label—it opens an entirely new chapter in respiratory microbiology. 🫁✨ We still have a lot to learn about the mechanisms that allow these "anaerobes" to adapt to our airways so seamlessly. We are looking forward to working to understand how Prevotella thrives 5/6
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Dr. Ari Kozik @drkozik.bsky.social · 24/01/2026
🔎💻 We then went to the transcriptome to look under the hood and found evidence for reprogramming associated with oxygen exposure that deploys defense strategies we didn't know it had!! 🛡️ 4/6
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Dr. Ari Kozik @drkozik.bsky.social · 24/01/2026
By directly testing intermediate --- higher than 0%, but not only 21% (room air) oxygen levels--- we found that P. melaninogenica actually has a robust ability to grow in intermediate oxygen AND can even stay alive without replicating in higher levels of oxygen. 3/6
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Dr. Ari Kozik @drkozik.bsky.social · 24/01/2026
Microbiome data shows that P. melaninogenica can make up ~10% of the airway bacterial community. We see it in datasets from both asthma/COPD and healthy people. Hiding in the one place it 'shouldn't' be. Turns out, P. melaninogenica is much more versatile than we thought 2/6
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Dr. Ari Kozik @drkozik.bsky.social · 24/01/2026
Just when we think we've got them figured out, bacteria find a way to surprise us. For a century we've been calling Prevotella melaninogenica a strict anaerobe (oxygen =☠️), but its been chillin' in oxygen rich parts of the body -- the respiratory tract 👄🫁. A thread on a new preprint from my lab🧵:
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Claire E Albright @clairealbright.bsky.social · 24/01/2026
I am pleased to announce the submission of my first author manuscript, "Aerotolerant Capacity of the Lung Commensal Prevotella melaninogenica," now available as a preprint. 🧫🧫🧫 Thank you to my mentors Dr. Ariangela Kozik @drkozik.bsky.social and Dr. Gary Huffnagle at UM.
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Dr. Ari Kozik @drkozik.bsky.social · 02/01/2026
I am so so sorry. Sending you strength for the healing ahead.
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Reposted by Dr. Ari Kozik
Chris Smith @drchristsmith.bsky.social · 04/12/2025
The latest paper from our faculty job market collaboration team @nafisajadavji.bsky.social @drkozik.bsky.social is out in Studies in Graduate and Postdoctoral Education investigating the humanities and social sciences academic job market. @futurepislack.bsky.social www.emerald.com/sgpe/article...
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Dr. Ari Kozik @drkozik.bsky.social · 21/11/2025
Whatttttttttt. I just talked to them todayyyy.
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Dr. Ari Kozik @drkozik.bsky.social · 01/11/2025
…deeply saddened to see this. Zara, you will be missed. This year has taken so much from us.
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Nafisa Jadavji, PhD, FAHA @nafisajadavji.bsky.social · 02/10/2025
Thanks to @bwfund.bsky.social for their support! Our team (@drkozik.bsky.social @drchristsmith.bsky.social @lilyycheng.bsky.social, Ada Haagan, and Amanda Haage) has been collecting data since 2018 on the faculty job market, check out our work at: faculty-job-market-collab.org
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Reposted by Dr. Ari Kozik
Peaches von Strangle @vantablackvamp.blacksky.app · 21/09/2025
Happy Earth, Wind and Fire DAY!!!!
media.tenor.com
a man with a beard is wearing a hat and a striped shirt and saying `` do you remember '' .
ALT: a man with a beard is wearing a hat and a striped shirt and saying `` do you remember '' .
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Dr. Annie Andrews @drannieandrews.com · 04/09/2025
I’m just a girl, who did a spinal tap on a preschooler last week, asking you to fire RFK Jr.
media.tenor.com
a woman in a blue shirt is looking at a man in a pink shirt .
Alt: a woman in a blue shirt is looking at a man in a pink shirt , scene from Notting Hill
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Ouija F. Baby @heartbreakscholar.bsky.social · 20/08/2025
My senior thesis was titled “The osteological manifestations of enslavement” The number of parry fractures in adult and sub-adult bones was heartbreaking. (A parry fracture is a broken ulna resulting from trying to block a direct strike to the face or upper body)
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Dr. Ari Kozik @drkozik.bsky.social · 07/08/2025
OD600
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Dr. Ari Kozik @drkozik.bsky.social · 07/08/2025
Correct
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Reposted by Dr. Ari Kozik
Chris Smith @drchristsmith.bsky.social · 29/07/2025
If you applied to assistant professor positions in North America in 2024-2025, we want to hear from you as we continue to collect data on the applicant experience. Thanks also to @bwfund.bsky.social for their support of our work! Link to 2024-25 Applicant Survey. und.qualtrics.com/jfe/form/SV_...
und.qualtrics.com
Online Survey Software | Qualtrics Survey Solutions
Qualtrics sophisticated online survey software solutions make creating online surveys easy. Learn more about Research Suite and get a free account today.
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Chris Smith @drchristsmith.bsky.social · 29/07/2025
Are you planning to apply for faculty positions in North America this Fall? Our team of researchers have synthesized 3 years of applicant survey data to create a dashboard to allow assistant professor candidates to see where they stand. faculty-job-market-collab.org/dashboard/
faculty-job-market-collab.org
Explore Our Data | Faculty Job Market Collaboration
A record of our team's research and funding.
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Phil Hare's Ghost @mrlepus.eurosky.social · 24/07/2025
Wrong. It is, and always will be, this. youtu.be/o589CAu73UM?...
youtu.be
High-pitched voice theory - Neanderthal - BBC science
YouTube video by BBC Studios
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Ben Collins @bencollins.bsky.social · 24/07/2025
when they close it all up, I do believe this will go down as the funniest video on the internet
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Dr. Ari Kozik @drkozik.bsky.social · 12/07/2025
Thrilled to share the first preprint from my group! Prevotella are predominant but understudied members of the respiratory microbiome. They have a reputation for being hard to work with, but understanding them is likely important for understanding how they contribute to respiratory health. 🧫🔬
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Sarah Churchwell @sarahchurchwell.bsky.social · 14/06/2025
Hope is the thing with feathers that perches in the soul and sings the tune without the words and never stops at all. /Fin
The text of the poem
“Hope” is the thing with feathers -
That perches in the soul -
And sings the tune without the words -
And never stops - at all -

And sweetest - in the Gale - is heard -
And sore must be the storm -
That could abash the little Bird
That kept so many warm -

I’ve heard it in the chillest land -
And on the strangest Sea -
Yet - never - in Extremity,
It asked a crumb - of me.
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Krystal Vasquez @kvasquez.bsky.social · 13/06/2025
FYI: The House Committee on Science, Space, and Technology, Democratic Staff, is trying to get more info on the impact of recent research grant terminations. If your award has been canceled since Jan 20, you can fill out this survey: democrats-science.house.gov/grantcancela...
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Dr. Ari Kozik @drkozik.bsky.social · 13/06/2025
Wolfgang Amadeus indeed. I think you are thinking of Confutatis, which is absolutely the next track I listened to 😆
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Dr. Ari Kozik @drkozik.bsky.social · 13/06/2025
Playlist was on random and Lacrimosa from Mozarts Requiem came on…and I had to just turn it up and let him cook because what is this timeline.
media.tenor.com
a woman wearing sunglasses is holding a cup of coffee and saying shut it down
Alt: a woman wearing sunglasses is holding a cup of coffee and saying shut it down
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Dr. Ari Kozik @drkozik.bsky.social · 03/06/2025
…..there’s a lesson in here somewhere.
media.tenor.com
a cartoon of a coyote with binoculars and the words looney tunes on the bottom right
Alt: a cartoon of a coyote with binoculars and the words looney tunes on the bottom right
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Nafisa Jadavji, PhD, FAHA @nafisajadavji.bsky.social · 27/05/2025
Were you postdoc on the faculty job market May 2024 - May 2025? Are you a new assistant professor who landed your position (any field!) in the past year? We want to hear from you about your experience on the faculty job market.
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