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David Favero

@davefaveplants.bsky.social
88 followers 131 following 6 posts

Senior Editor at Communications Biology. Plant biology. Views are my own.

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Reposted by David Favero
Communications Biology @commsbio.nature.com · 11/09/2026
🌱🧬A new protoplast-based platform enables transient transformation and proof-of-concept CRISPR/Cas12a-mediated #genome editing in European #beech, a key but recalcitrant forest tree species. Learn more in this new article in Communications Biology doi.org/10.1038/s420...
doi.org
Genetic transformation and CRISPR/Cas12a-mediated gene editing of European beech (Fagus sylvatica L.) employing a transient protoplast system - Communications Biology
A new protoplast-based platform enables transient transformation and proof-of-concept CRISPR/Cas12a-mediated genome editing in European beech, a key but recalcitrant forest tree species.
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 19/08/2026
(1/2) Our first Editor's Picks is now on @researchgate.bsky.social! Selected by our in-house Editor, Dr Jasmine Pan, take a look to see articles covering: ⭐ The proportion of Amazonian tree species that rely on animals for pollination & seed dispersal (spoiler: 80%) 🌴
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 12/06/2026
We are revisiting a Collection topic from a couple years ago via this cross-journal Collection with @natcomms.nature.com and Scientific Reports, where we are again inviting submissions in the area of Medicinal Plant Genomics🌱🧬 www.nature.com/collections/...
nature.com
Medicinal Plant Genomics 2026
In this cross-journal collection, we invite submissions medicinal plant genomics with the focus on genome assembly, population genetics, comparative genomics, ...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 11/06/2026
Together with @natcomms.nature.com and Scientific Reports, welcome studies developing and utilizing advanced technologies such as epigenomic mapping, single cell epigenomics, and multi-omics approaches to provide insights into plant epigenetic mechanisms. www.nature.com/collections/...
nature.com
Plant Epigenetics and Epigenomics
With this cross-journal Collection, the editors at Nature Communications, Communications Biology and Scientific Reports invite manuscripts that highlight how ...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 11/06/2026
For a cross-journal Collection with @natcomms.nature.com, @natplants.nature.com, and Scientific Reports, we welcome research articles, reviews, and methodological papers that contribute to our understanding of proteolysis as a fundamental and multifaceted regulator of plant life. go.sn.pub/yx8c14
go.sn.pub
Proteolysis in Plants
The objective of this collection is to provide a comprehensive overview of the latest research on the molecular mechanisms, regulatory networks and roles of ...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 03/06/2026
🧪 Dr. Hong-Bo Jiang has joined our editorial board in the Ecology & Evolution section! Dr. Jiang specializes in insect physiology, insect chemical ecology, insect olfaction and gustation and genetic control. We’re excited to have them on board! 🐜🧬
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Reposted by David Favero
Eduardo Mateo Bonmatí @emateobonmati.bsky.social · 04/06/2026
Delighted to share our latest publication in @commsbio.nature.com! @cbgpmadrid.bsky.social. This story started a long time ago when I was a postdoc at Ljung´s group in @umeaplantsciencecentre.se , led by the great Rubén Casanova-Sáez www.nature.com/articles/s42...
nature.com
Comprehensive characterisation of IAA inactivation pathways reveals the impact of glycosylation on auxin metabolism and plant development in Arabidopsis - Communications Biology
Integrated genetic and metabolic approaches dissect auxin inactivation, revealing pathway order between GH3 and DAO enzymes and a stronger-than-anticipated contribution of glycosylation to IAA homeost...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 02/06/2026
📣Announcing the newest addition to our editorial board in the Ecology & Evolution section: Dr. Brock Harpur! We're thrilled to have Dr. Harpur's expertise in social behavior, evolution, genetics, genomics, insects and population genetics. 🐝🧬
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 08/05/2026
🌽🧬🐛 Together with @natcomms.nature.com and Scientific Reports, we invite articles in all areas of research investigating the roles of RNA in plant biotic interactions (including plant-microbe, plant-insect, and plant-plant interactions). www.nature.com/collections/...
nature.com
RNA biology in plant biotic interactions
The editors invite articles in all areas of research investigating the roles of RNA in plant biotic interactions.
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 06/05/2026
🌱🦠🧫 Together with @natcomms.nature.com, @natplants.nature.com and Scientific Reports, we invite manuscripts that investigate plastid biology or explore the fundamental principles governing plastid origin, integration, and diversification across the eukaryotic tree of life. go.sn.pub/z7b5je
go.sn.pub
Plastids: from Phylogeny to Physiology
With this cross-journal Collection, the editors at Communications Biology, Nature Communications, Nature Plants, and Scientific Reports invite manuscripts ...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 04/03/2026
🍎🪰 Polyphagous fruit flies (Tephritidae) exhibit species-specific olfactory tuning to host fruit compounds, suggesting an evolved balance between detection and discrimination, with potential implications for ecological management and pest control strategies. www.nature.com/articles/s42...
nature.com
Olfaction in fruit flies (Tephritidae) balances detection and discrimination of host fruits - Communications Biology
Challenging a central assumption in chemical ecology, we show that polyphagous fruit flies do not rely solely on volatiles shared across hosts: compounds specific to particular hosts shape oviposition...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 12/12/2025
We welcome submissions of papers focused on genome assembly, population genetics, marker-trait association studies, gene cloning, and breeding technique development and implementation in orphan crops to our joint collection that includes @natcomms.nature.com @commssustain.nature.com go.sn.pub/3gehui
go.sn.pub
Orphan crop genomics and improvement 2025
This Orphan Crop Genomics and Improvement Collection welcomes submissions on orphan crops genomics, genetics, and breeding.
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 02/12/2025
New perspective 🦠: the ancestral evolutionary states of thylakoid membranes may have been initially dedicated to non-oxygenic alternative electron flows. #cyanobacteria @bccmcollections.bsky.social @universitedeliege.bsky.social www.nature.com/articles/s42...
nature.com
On the non-oxygenic origins of thylakoids - Communications Biology
The ancestral evolutionary states of thylakoid membranes may have been initially dedicated to non-oxygenic alternative electron flows.
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 26/11/2025
PBAT plastic exposure decreases taxonomic diversity across multi–kingdom soil microbiota, while enriching functional diversity, genome size, and genes for plastic degradation and carbon, nitrogen, phosphorus, and sulfur cycling. www.nature.com/articles/s42...
nature.com
Biodegradable plastic exposure enhances microbial functional diversity while reducing taxonomic diversity across multi-kingdom soil microbiota in cherry tomato fields - Communications Biology
PBAT plastic exposure decreases taxonomic diversity across multi–kingdom soil microbiota, while enriching functional diversity, genome size, and genes for plastic degradation and carbon, nitrogen, pho...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 13/11/2025
Metabolomic reprogramming in a high-yield ginger cultivar shapes microbiome assembly, enriching keystone taxa like Devosia and Talaromyces, which enhance nutrient cycling and yield, offering a basis for microbiome-informed crop design. doi.org/10.1038/s420...
doi.org
Metabolome-driven microbiome assembly in ginger (Zingiber officinale) enhances nutrient cycling and crop yield through keystone taxa - Communications Biology
Metabolomic reprogramming in a high-yield ginger cultivar shapes microbiome assembly, enriching keystone taxa like Devosia and Talaromyces, which enhance nutrient cycling and yield, offering a basis f...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 11/11/2025
A warm welcome to Dr. Vincent Courdavault, who joins our Plant Biology section as an editorial board member! Their work in plant specialized metabolism, alkaloids, plant genetic transformation, yeast engineering and muti-omics approaches will be a valuable addition. Welcome aboard! 🌱🧬
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 04/11/2025
Single-cell profiling in rubber tree saplings to water-deficit stress identifies seven bark cell types and ABA-mediated drought responses, including uniform ABF2/3/4 induction. www.nature.com/articles/s42...
nature.com
Transcriptomic response analysis of rubber tree saplings to water-deficit stress at single-cell resolution - Communications Biology
Single-cell profiling in rubber tree saplings to water-deficit stress identifies seven bark cell types and ABA-mediated drought responses, including uniform ABF2/3/4 induction.
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 24/10/2025
🧬🌿 Dr. Taikui Zhang is joining our editorial board in the Ecology & Evolution section! Dr. Zhang brings expertise in angiosperms, (pan-)genomics, evolutionary genomics, phylogenomics, whole genome duplications, and bioinformatics. Welcome aboard! 🌱
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 17/10/2025
This new study in Communications Biology provides evidence on how carbon metabolism regulates cell division among cyanobacteria. TCA pathway manipulation directly impacts the FtsZ-dependent cell division by regulating its expression via the transcriptional factor NtcA. 🦠 doi.org/10.1038/s420...
doi.org
Carbon metabolism shapes FtsZ levels and cell division in the cyanobacterium Anabaena PCC 7120 - Communications Biology
This study provides evidence on how carbon metabolism regulates cell division among cyanobacteria. Manipulation of the TCA pathway directly impacts the FtsZ-dependent cell division by regulating its e...
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Reposted by David Favero
PlantEvolution 🌱🌾 @plantevolution.bsky.social · 10/10/2025
Congrats, Joe Ecker @salkinstitute.bsky.social, to receiving the McClintock Prize! Joe has been a visionary leader of the field of genetics and genomics – not only for plants – for decades www.salk.edu/news-release...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 24/07/2025
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 21/07/2025
Reciprocal cooperation at the early stage between an arbuscular mycorrhizal fungus and a phosphate-solubilizing bacterium is mediated by external phosphorus availability. www.nature.com/articles/s42...
nature.com
Early-stage reciprocal cooperation between the arbuscular mycorrhizal fungus Rhizophagus irregularis and the phosphate-solubilizing bacterium Rahnella aquatilis is dependent on external phosphorus ava...
Reciprocal cooperation at the early stage between an arbuscular mycorrhizal fungus and a phosphate-solubilizing bacterium is mediated by external phosphorus availability.
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 14/07/2025
Our editor Michele Repetto is at the Ecological and Evolutionary Genomics #GRC meeting, Dynamics of Ecological and Evolutionary Change. Find her at the conference for a chat about your research and publishing with our journal!
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 10/07/2025
A lab experiment shows that Dark Septate Endophytes can form common fungal networks between plants, increasing biomass and enabling water movement, suggesting that non-mycorrhizal fungi may contribute to plant connectivity. www.nature.com/articles/s42...
nature.com
Evidence for common fungal networks among plants formed by a Dark Septate Endophyte in Sorghum bicolor - Communications Biology
A lab experiment shows that Dark Septate Endophytes can form common fungal networks between plants, increasing biomass and enabling water movement, suggesting that non-mycorrhizal fungi may contribute...
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Reposted by David Favero
Luiselotte Rausch @luiselotterausch.bsky.social · 01/07/2025
The best part of conferences: Meeting old friends and making new ones 😊 @davefaveplants.bsky.social @keikosugimoto.bsky.social @ipgsa2025.bsky.social #IPGSA #plantscience
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David Favero @davefaveplants.bsky.social · 26/06/2025
Have expertise in computational biology? Our journal is looking for a Locum Associate Editor with expertise in this area. springernature.wd3.myworkdayjobs.com/SpringerNatu...
springernature.wd3.myworkdayjobs.com
Locum Associate Editor
Job Description: Job Title: Locum Associate Editor - Communications Biology Location: Pune or Shanghai (Hybrid working) Nature Portfolio is the world’s leader in publishing high-quality research from ...
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David Favero @davefaveplants.bsky.social · 17/06/2025
In transit now to Luxembourg to represent @commsbio.nature.com at the Phytofactories 2025 meeting. If you're attending, stop by and chat with me during the meet-the-editor session tomorrow (Wednesday) from 5:30-7:00 PM! eventform.plantae.org/plantae.cale...
eventform.plantae.org
Phytofactories 2025
Wed 18 Jun, 10:30 AM - Fri 20, 4:00 PM [EDT]: Phytofactories 2025, an international conference on Plant Molecular Farming, hosted by the Luxembourg Institute of Science and Technology (LIST), will tak...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 10/06/2025
Photosynthetic #sacoglossan sea slugs lose state transitions due to structural changes of their kleptoplasts, whereas Bryopsidales #algae show an evolutionary loss of state transitions, highlighting the diverse light-use strategies of green algae. www.nature.com/articles/s42... @vesahavu.bsky.social
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 09/06/2025
Smallholder-maintained #cowpea varieties in Southern Africa hold valuable genetic traits for adapting to a changing climate, offering key insights for breeding resilient #crops and strengthening future food security.🌍 @mdellacq.bsky.social www.nature.com/articles/s42...
nature.com
Cowpea (Vigna unguiculata L. Walp.) landraces in Mozambique and neighbouring Southern African countries harbour genetic loci with potential for climate adaptation - Communications Biology
Smallholder-maintained cowpea varieties in Southern Africa hold valuable genetic traits for adapting to a changing climate, offering key insights for breeding resilient crops and strengthening future ...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 29/05/2025
Resequencing of a core collection of tef, an indigenous cereal, identifies genetic redundancy and candidate genes for grain colour, size and metabolite content variation. www.nature.com/articles/s42...
nature.com
Population genomics uncovers loci for trait improvement in the indigenous African cereal tef (Eragrostis tef) - Communications Biology
Resequencing of a core collection of tef, an indigenous cereal, identifies genetic redundancy and candidate genes for grain colour, size and metabolite content variation.
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 22/05/2025
🌱A study on the response of different resistant Amorphophallus species to Pcc stress reveals that endophytic fungal taxa play a key role in host plant's defense against necrotizing bacterial pathogens. doi.org/10.1038/s420...
doi.org
Changes in the assembly and functional adaptation of endophytic microbial communities in Amorphophallus species with different levels of resistance to necrotrophic bacterial pathogen stress - Communic...
A study on the response of different resistant Amorphophallus species to Pcc stress reveals that endophytic fungal taxa play a key role in host plant’s defense against necrotizing bacterial pathogens.
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David Favero @davefaveplants.bsky.social · 09/05/2025
Featured on the @commsbio.nature.com homepage: in a genus of perennial herbs (Aquilegia spp) incomplete lineage sorting contributes to phenotypic convergence in a recent cryptic radiation while standing genetic variation and introgression facilitate rapid adaptive divergence www.nature.com/commsbio/
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 09/05/2025
🌳🌱Last days to submit to our cross-journal Collection with @natcomms.nature.com & Scientific Reports on plant responses and adaptations to abiotic stress:🌲🪴 www.nature.com/collections/...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 08/05/2025
Our 2025 cross-journal Collection on biotechnology for a circular economy on one carbon assimilation, bio-manufacturing, waste management, recycling, bio-energy, including computational methodology on the above fields, will present updates to our 2023 collection: www.nature.com/collections/...
nature.com
Biotechnology for a circular economy 2025
This collection welcomes research in, but not limited to carbon assimilation, biomanufacturing, waste management, and bioenergy. We are also interested in ...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 08/05/2025
MusaPUB22/23 knockout in banana plants enhances resistance to Xanthomonas wilt (BXW) without compromising growth. These findings highlight the role of U-box E3 ligases in plant immunity and the potential of using this approach for disease-resistant crop engineering www.nature.com/articles/s42...
nature.com
Loss of function of MusaPUB genes in banana can provide enhanced resistance to bacterial wilt disease - Communications Biology
MusaPUB22/23 knockout in banana plants enhances resistance to Xanthomonas wilt (BXW) without compromising growth. These findings highlight the role of U-box E3 ligases in plant immunity and the potent...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 01/05/2025
An L-aminoacylase in the oral secretion of fall armyworm larvae attenuates inducible plant defense responses by degrading herbivore-associated signal molecules and promotes larvae growth on their preferred host plant species. doi.org/10.1038/s420...
doi.org
The Spodoptera frugiperda L-aminoacylase degrades fatty acid-amino acid conjugates and promotes larvae growth on Zea mays - Communications Biology
An L-aminoacylase in the oral secretion of fall armyworm larvae attenuates inducible plant defense responses by degrading herbivore-associated signal molecules and promotes larvae growth on their pref...
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Reposted by David Favero
Shahid Mukhtar @smukhtarlab.bsky.social · 30/04/2025
🚨 Postdoc and Lab Tech Opportunities🌱🔬 We are hiring a Postdoctoral Researcher and a Lab Technologist to join our dynamic lab at Clemson Univ. The area of interests are single cell and spatial biology. RT and DM apply.interfolio.com/158814 nam12.safelinks.protection.outlook.com?url=https%3A...
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Reposted by David Favero
Ryo Yokoyama @yokoyama-ryo.bsky.social · 24/04/2025
Mechanisms of plant acclimation to multiple abiotic stresses www.nature.com/articles/s42... @commsbio.bsky.social
nature.com
Mechanisms of plant acclimation to multiple abiotic stresses - Communications Biology
A review summarizes the current understanding of the complex molecular pathways mediating plant responses to multiple abiotic stresses, and discusses current and future challenges and unanswered quest...
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Reposted by David Favero
Nature @nature.com · 23/04/2025
Researchers pinpoint the genes responsible for the final three pea traits studied by Gregor Mendel more than 160 years ago go.nature.com/3EC3eqT
go.nature.com
Century-old genetics mystery of Mendel’s peas finally solved
Researchers pinpoint the genes responsible for the final three pea traits studied by the famed citizen scientist.
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 18/04/2025
A study on rice pollination using single-cell metabolomics and microscopy reports a discovery such that pollen grains attached show "Roly-poly toy"-like physical motion subsequently after exudation, leading to pollen adhesion and germination to facilitate rapid pollination. doi.org/10.1038/s420...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 17/04/2025
Barley landraces house unique variation that can help adapt this food crop to a changing climate. A de-novo core collection is used to predict which individual barley landraces have the most potential to help with adaptation to adverse environments. doi.org/10.1038/s420...
doi.org
Environmental genomic selection to leverage polygenic local adaptation in barley landraces - Communications Biology
Barley landraces house unique variation that can help adapt this food crop to a changing climate. A de-novo core collection is used to predict which individual barley landraces have the most potential...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 14/04/2025
Highlighted today in @phys.org.web.brid.gy, development of a mathematical model provides a non-linear dynamics explanation for the formation of petal patterns in broken tulips. Article on Phys.org: phys.org/news/2025-04... Original article 👇 www.nature.com/articles/s42... PC: Thomas Hillen
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 11/04/2025
🧬🌿 Comparative genomic study of the Colletotrichum gloeosporioides species complex provides insights into the role of chromosomal rearrangements, mediated by repetitive sequences, drive genetic diversification and host adaptation in the phytopathogens doi.org/10.1038/s420...
doi.org
Phylogenomics and adaptive evolution of the Colletotrichum gloeosporioides species complex - Communications Biology
Comparative genomic study of the Colletotrichum gloeosporioides species complex provides insights into the role of chromosomal rearrangements, mediated by repetitive sequences, drive genetic diversifi...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 10/04/2025
Welcoming our newest Communications Biology Editorial Board members this month! 😊 First up, a big welcome to Yuhong Cao, joining our Bioengineering & Biotech team! Yuhong brings expertise in mRNA technology, circRNA sequencing design, plant genome engineering & breeding, and nanotechnology.
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 08/04/2025
An alignment-free deep learning framework predicts DNA-binding proteins and residues from primary sequences, eliminating multiple sequence alignments (MSAs). It uses protein language models and class-weighted training to address data imbalance and improve accuracy doi.org/10.1038/s420...
doi.org
TransBind allows precise detection of DNA-binding proteins and residues using language models and deep learning - Communications Biology
An alignment-free deep learning framework predicts DNA-binding proteins and residues from primary sequences, eliminating multiple sequence alignments (MSAs). It uses protein language models and class-...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 08/04/2025
Our editor Laura will be giving a talk at the @universidadoviedo.bsky.social this Thursday 10th at 1pm, please come if you want to learn more about our journal and the editorial process in the Nature Portfolio!
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David Favero @davefaveplants.bsky.social · 07/04/2025
The gibberellic acid phytohormone biosynthesis inhibitor paclobutrazol induces triterpenoid biosynthesis in the fungus Sanghuangporus lonicericola.
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 04/04/2025
Microscopic imaging and machine learning reveal coordinated spatial patterns of chloroplasts and stomata during cacao leaf development, suggesting an acropetal maturation process crucial for flush growth. www.nature.com/articles/s42...
nature.com
Spatial patterning of chloroplasts and stomata in developing cacao leaves - Communications Biology
Microscopic imaging and machine learning reveal coordinated spatial patterns of chloroplasts and stomata during cacao leaf development, suggesting an acropetal maturation process crucial for flush gro...
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Reposted by David Favero
Communications Biology @commsbio.nature.com · 02/04/2025
Grains suppress ovaries in ears of maize to strengthen their sugar utilization advantage for development, potentially through hormone and MAPK signaling. www.nature.com/articles/s42...
nature.com
Siblicide between fertilized and unfertilized ovaries within the maize ear - Communications Biology
Grains suppress ovaries in ears of maize to strengthen their sugar utilization advantage for development, potentially through hormone and MAPK signaling.
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