Emma Chory, Ph.D. @chorye.bsky.social · 04/03/2026Evolution navigated billions of challenges to get to us to where we are today. Directed evolution compresses this to a 1D axis. Imagine if you could sample 200 dimensions at once, with data to boot 📈 First @chorylab.bsky.social PACE preprint on our new system to tackle this: bit.ly/turboprance 12310
Emma Chory, Ph.D. @chorye.bsky.social · 13/11/20252011 v 2025. Variance not statistically significant. 070
Emma Chory, Ph.D. @chorye.bsky.social · 24/10/2025Best group costume 2025! #JurassicLab 🦕🦖 @dukeubme.bsky.social @chorylab.bsky.social 1402
Emma Chory, Ph.D. @chorye.bsky.social · 02/07/2025Tattoos can be removed but the eRAcommons graveyard is forever. 3706
Emma Chory, Ph.D. @chorye.bsky.social · 05/06/2025This is a 2 sentence prompt, doing exactly what the screen capture suggests: "My name is Stephen Hawking. Based on the CV I provided, write 3-5 sentence summaries for my 5 major scientific contributions for a Biosketch. Each major contribution can describe up to 4 papers." 000
Emma Chory, Ph.D. @chorye.bsky.social · 05/06/2025A biosketch is literally taking your top 20 papers and writing 3-5 sentences (depending on the biosketch) grouping and summarizing your major contributors to field in laymens terms. This is a perfectly normal case study to demonstrate utility to researchers looking to better understand these tools 100
Emma Chory, Ph.D. @chorye.bsky.social · 25/05/2025Needed some “me time” but figured I should go out and be social, so I took my R01 on a date to the theater #selfcare 2242
Emma Chory, Ph.D. @chorye.bsky.social · 21/05/2025The NOFO has been updated with the expiration date 😞 100
Emma Chory, Ph.D. @chorye.bsky.social · 14/04/2025When investors learn that the trait for green eyes is also ~20 SNPs 0234
Emma Chory, Ph.D. @chorye.bsky.social · 23/03/2025Normalizing the editing process: Feedback is a good thing. Writing is iterative no matter how strong a writer you are. The more you normalize that, the less intimidating it feels. It might sting when someone cuts your favorite sentence—but you’ll survive, and it’ll be better for it. 19/n... 110
Emma Chory, Ph.D. @chorye.bsky.social · 23/03/2025You can also add dynamic in-text callouts like “see Figure X” or “[Fig. X]” that auto-update when figure numbers change-- in any custom style you like. Just link them to the figure’s ID (e.g. #fig_qPCR). (Note: fig v. figur!) Full instructions here: github.com/davidrthorn/... 14/n... 100
Emma Chory, Ph.D. @chorye.bsky.social · 23/03/2025Figure tracking with Cross Reference: Figure order always changes—especially after Reviewer #3. Instead of manually re-numbering, assign figures user-friendly IDs (e.g. #figur_qPCR). CrossRef automatically re-numbers and updates links. Shout out to @zachreitz.bsky.social for this tip!! 13/n... 120
Emma Chory, Ph.D. @chorye.bsky.social · 23/03/2025FIGURES! Tracking figures & making them play nice is like herding cats.... We’ve all fought with figures in Word—randomly shifting, disappearing like phantoms. Google Docs isn’t perfect, but it’s so much better. Pro tip: use a 1×2 table—image in one cell, caption in the other. 12/n... 100
Emma Chory, Ph.D. @chorye.bsky.social · 23/03/2025Any style you want: I use “National Library of Medicine (grant proposals with PMCID/PMID)” for grants—Paperpile finds PMCIDs >99% of the time, and also had an auto-update feature. But don’t forget to export straight to PDF and Edit -> remove links in Adobe Acrobat! 10/n... 110
Emma Chory, Ph.D. @chorye.bsky.social · 23/03/2025Search mid-doc (Shift + Cmd + P): search PubMed, Google Scholar, or your own library while writing. No reference library needed—just use keywords, author, PMID/PMCID, or direct links. It even remembers past refs and inserts them with one click. 9/n... 120
Emma Chory, Ph.D. @chorye.bsky.social · 23/03/2025Google Docs has a treasure trove of add-ons. You can create custom header styles, save formatting presets, and use smart chips to link between related docs. 6/n... 100
Emma Chory, Ph.D. @chorye.bsky.social · 23/03/2025Write from Anywhere (and I mean anywhere). I wrote across a bridge every day during my postdoc commute. Google Docs on mobile is shockingly robust—real-time edits, autosave, and easy stop-start if you get a text or almost walk into someone (sorry 😬). 5/n.... 100
Emma Chory, Ph.D. @chorye.bsky.social · 23/03/2025Version Control — “FINAL_v3_reallyFINAL.docx” is so 2010. Google Docs saves every keystroke, tracks changes, and lets you label snapshots (“Initial Draft,” “Emma’s Rewrite,” etc.). Pro tip: name versions as you go—it’ll help you in the long run. 4/n... 100
Emma Chory, Ph.D. @chorye.bsky.social · 05/02/2025Join us in June for the 2025 Synthetic Biology: Engineering, Evolution, & Design (SEED) meeting! #SEED2025. We have some phenomenal speakers lined up! Abstracts are due March 23rd! synbioconference.org/2025 1111
Emma Chory, Ph.D. @chorye.bsky.social · 27/01/2025Hey #labautomationfolks. If you’re at #SLAS2025, make sure to stop by Joseph Laforet’s poster on what Prof. @cameronkimbme.bsky.social and I have been working on this year re: open source robotics education with @pylabrobot.bsky.social! 🦾 www.linkedin.com/posts/joseph... 1102
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025Our robots are also prone to… well, floods. 🌧️ Everything has backup pumps and multiple levels of containment, but now we use liquid level sensors to catch issues early. 💧 If a leak’s detected, Slack immediately shouts at us. 13/n... 140
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025Our robots throw temper tantrums sometimes. 🤖💥 For this, we wrote custom email alerts into their code. These funnel to Slack, so we have a permanent record of what went wrong and can crowdsource fixing it. 🛠️🙌 12/n... 240
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025Freezers fail. 🥶 Incubators die. 🧫 Enough said. We have temp sensors on literally everything. They only send SMS, so: Google Voice → Zapier → Slack. No lost cell lines. 🙌 11/n... 140
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/20253️⃣ If you’ve made it this far… the final category is alerts 🚨 We created an email just for emergencies and slapped a label on all our equipment. Neighbors email us if something’s melting down. Zapier pings the Slack #alerts channel and texts me and one or two lab members. Crisis averted 🚨 10/n... 240
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025Zapier now integrates with the ChatGPT API, which does image to text, and extracts all the key details (prompts in images). Then it: 1️⃣ Logs the details into a spreadsheet for tracking 2️⃣ Saves the image to google drive This system took some effort to set up, but it’s been a game-changer. 9/n... 151
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025Processing receipts is literally the worst. Not everyone has a finance admin, and even if you do, it sucks to overload them with every little thing. This one is a little more advanced, but here’s how I do receipt tracking. I snap a photo, email it to our lab’s receipt email…. 8/n... 140
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025Group 2️⃣: Ugh. Money. No one teaches us to be accountants 💸 We use Quartzy for orders/inventory. Every time someone requests an item, quartzy webhook sends the info to Slack—tagging the requester and whoever’s responsible for placing the order. ✅ Same goes for when an order is received. 📦 7/n... 150
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025Our robots are also prone to… well, floods. 🌧️ Everything has backup pumps and multiple levels of containment, but now we use liquid level sensors to catch issues early. 💧 If a leak’s detected, Slack immediately shouts at us. 13/n... 100
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025Our robots throw temper tantrums sometimes. 🤖💥 For this, we wrote custom email alerts into their code. These funnel to Slack, so we have a permanent record of what went wrong and can crowdsource fixing it. 🛠️🙌 12/n... 100
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025Freezers fail. 🥶 Incubators die. 🧫 Enough said. We have temp sensors on literally everything. They only send SMS, so: Google Voice → Zapier → Slack. No lost cell lines. 🙌 11/n... 110
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/20253️⃣ If you’ve made it this far… the final category is alerts 🚨 We created an email just for emergencies and slapped a label on all our equipment. Neighbors email us if something’s melting down. Zapier pings the Slack #alerts channel and texts me and one or two lab members. Crisis averted. 🚨 10/n... 100
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025Zapier now integrates with the ChatGPT API, which does image to text, and extracts all the key details (prompts in images). Then it: 1️⃣ Logs the details into a spreadsheet for tracking 2️⃣ Saves the image to google drive This system took some effort to set up, but it’s been a game-changer. 9/n... 110
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025Processing receipts is literally the worst. Not everyone has a finance admin, and even if you do, it sucks to overload them with every little thing. This one is a little more advanced, but here’s how I do receipt tracking. I snap a photo, email it to our lab’s receipt email…. 8/n... 100
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025Group 2️⃣: Ugh. Money. No one teaches us to be accountants 💸 We use Quartzy for orders/inventory. Every time someone requests an item, quartzy webhook sends the info to Slack—tagging the requester and whoever’s responsible for placing the order. ✅ Same goes for when an order is received. 📦 7/n... 200
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025We also have weekly lab jobs on a rotating schedule. Each week Zapier sends personalized Slack reminders with checklists to whoever is ”task master”. Same principle. 6/n... 140
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025Lab meeting is sacred, and bagels are non-negotiable 🥯, but it helps to have a reminder. Here’s how it works: Zapier checks a Google Sheet every week to look up who’s presenting, on bagel duty. Then it sends reminders via Slack and email (and attaches an animal gif, because why not). 5/n... 140
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025We get a lot of interest from @dukeubme.bsky.social undergrads—but I’m hopeless with email. We created a Google Form for students, and Zapier sends responses to a private Slack channel for PhD students and postdocs. This way, every student gets seen, and less people get left behind. 4/n... 1101
Emma Chory, Ph.D. @chorye.bsky.social · 02/01/2025DISCLAIMER: you do NOT have to be a paragon of organization to do this. Exhibit A: My postdoc bench was an absolute dumpster fire. However, we use Zapier to integrate google drive, Quartzy, slack, and emails— it manages the chaos so we can focus more on science. 2/n... 130
Emma Chory, Ph.D. @chorye.bsky.social · 02/12/2024I also said it funded more science with less salary. And if you consider who wins and who loses in these investments, one could argue it also creates substantially more value. 100
Emma Chory, Ph.D. @chorye.bsky.social · 12/11/2024Hello science friends! Excited to set up shop over here with the @chorylab.bsky.social, now that the bad place has become an official 🗑️🔥 I’ll be reposting some old classics & useful tweetorials over the next few weeks. So glad to see you all here 👋 A throwback: 0163