Sign in

Christopher Southan

@cdsouthan.bsky.social
476 followers 70 following 138 posts

Joining the dots between chemistry and biology (full profile on LinkedIN)

PostsRepliesMedia
Christopher Southan @cdsouthan.bsky.social · 11/09/2026
Presentation at ACS Chicago - great session for a great bloke :) lnkd.in/eYb_gDAn
000
Christopher Southan @cdsouthan.bsky.social · 11/09/2026
Enjoyable CINF session at ACS Chicago lnkd.in/erfeu_up
001
Reposted by Christopher Southan
Egon Willighagen @egonw.social.edu.nl.ap.brid.gy · 04/09/2026
icymi: ChEBI is hiring a curator! "Open Position: Chemistry Curator" chembl.blogspot.com/2026/08/open-po… #chemistry #openscience
chembl.blogspot.com
Open Position: Chemistry Curator
We are looking for a talented scientist with a flair for data curation to be responsible for the quality of chemical and associated data in...
037
Christopher Southan @cdsouthan.bsky.social · 04/09/2026
Good 2c this major update
010
Christopher Southan @cdsouthan.bsky.social · 03/09/2026
Presented as part of an enjoyable visit to the BindingDB team at UC San Diego Skaggs School of Pharmacy and Pharmaceutical Sciences August 2026 #BACE1 #Alzheimers lnkd.in/dc2dem2m (Zenodo 22258774)
000
Christopher Southan @cdsouthan.bsky.social · 20/08/2026
Presenting at Skaggs School of Pharmacy as guest of Michael Gilson on Fri 28 Aug "The Alzheimer’s beta secretases: pathology, pharmacology and evolution at the dawn of the nervous system" (notice attached). Anyone in CA with interests in #BACE1 #Alzheimer's and #drugtargetevolution are welcome
000
Christopher Southan @cdsouthan.bsky.social · 20/08/2026
Look forward to presenting @ ACS Chicago "Envisaging the future of patent-extracted Chemistry in PubChem" , Mon, 24, 10:15-35 , N427a - McCormick Place. "Value and challenges of open data curation" at Tue 25th Skolnik Award for Antony Williams, 8:55-9:20 (same room). Social event pings welcome
000
Reposted by Christopher Southan
Christopher Southan @cdsouthan.bsky.social · 04/08/2026
A dive into the bamboozling world of patent sequence searching #notforthefeinthearted with honourable mentions for the open patent sequence collections @ NCBI, EMBL-EBI and The Lens cdsouthan.blogspot.com/2026/07/aacr...
cdsouthan.blogspot.com
AACR new biologics: a patent sequence analysis primer
Following on from the AACR 2026 disclosures of the small molecules we can now turn to the important related topic of the biologics. The fir...
001
Reposted by Christopher Southan
IUPHAR/BPS Guide to Pharmacology @gtopdb.bsky.social · 03/08/2026
Guide to Pharmacology will soon require users to register in order to use our website and use API Keys to access our REST API . These changes are expected to be made towards the end of August 2026. For more information, please see our blog post: blog.guidetopharmacology.org/2026/07/29/u...
blog.guidetopharmacology.org
User registration is coming to GtoPdb
The IUPHAR/BPS Guide to Pharmacology is making some changes to how the database and REST API (Web Services) are accessed. We will soon be requiring users to register with the Guide to Pharmacology …
022
Christopher Southan @cdsouthan.bsky.social · 04/08/2026
A dive into the bamboozling world of patent sequence searching #notforthefeinthearted with honourable mentions for the open patent sequence collections @ NCBI, EMBL-EBI and The Lens cdsouthan.blogspot.com/2026/07/aacr...
cdsouthan.blogspot.com
AACR new biologics: a patent sequence analysis primer
Following on from the AACR 2026 disclosures of the small molecules we can now turn to the important related topic of the biologics. The fir...
001
Christopher Southan @cdsouthan.bsky.social · 03/08/2026
Wow, I knew UniProt UniParc was big but had not come across this impressive breakdown #motherofallproteindbs #goodstuffEBI #publicpluspatents
000
Christopher Southan @cdsouthan.bsky.social · 30/07/2026
Gosh, so next time I swim into one of those pesky Lions Mane jellies here in Naset (West Goteborg) will I pick up more than just the sting?
100
Christopher Southan @cdsouthan.bsky.social · 30/07/2026
Who knew there were such a lorra proteins to BLAST against? #goodstuffNCBI #keepitup
000
Christopher Southan @cdsouthan.bsky.social · 21/07/2026
Cant fix this Blogger formatting quirk, any suggestions please?
001
Christopher Southan @cdsouthan.bsky.social · 10/07/2026
Today's #greatcompoundrace represents a longer interval but growth has generally been slow, with the arguable exception of CAS who announced their 300 millionth last month but Elsevier | Life Sciences Reaxys stays out in front (but note they subsume PubChem).
000
Reposted by Christopher Southan
Christopher Southan @cdsouthan.bsky.social · 08/07/2026
A short introduction to the IUPHAR/BPS Guide to PHARMACOLOGY curated entries and digging out patent SAR tables for the six small-molecules disclosed recently at American Association for Cancer Research (AACR) cdsouthan.blogspot.com/2026/07/aacr...
cdsouthan.blogspot.com
AACR San Diego 2026 early clinical compound disclosures
This 2026  session at the AACR (American Association for Cancer Research) 2026 Annual Meeting in San Diego included the first time disclosur...
001
Christopher Southan @cdsouthan.bsky.social · 10/07/2026
Pah, just make your own cheapo ones
000
Christopher Southan @cdsouthan.bsky.social · 08/07/2026
A short introduction to the IUPHAR/BPS Guide to PHARMACOLOGY curated entries and digging out patent SAR tables for the six small-molecules disclosed recently at American Association for Cancer Research (AACR) cdsouthan.blogspot.com/2026/07/aacr...
cdsouthan.blogspot.com
AACR San Diego 2026 early clinical compound disclosures
This 2026  session at the AACR (American Association for Cancer Research) 2026 Annual Meeting in San Diego included the first time disclosur...
001
Christopher Southan @cdsouthan.bsky.social · 28/06/2026
Difference to Galaxy?
100
Christopher Southan @cdsouthan.bsky.social · 28/05/2026
A bit short notice but all in the vicinity of Edinburgh are most welcome (its open to non-Uni visitors) but I will post slides later (n.b. Honorary rather than the real thing but hey... :)
000
Christopher Southan @cdsouthan.bsky.social · 27/05/2026
Anyone know (or has) a working webserver for the prediction of Cys palmitoylation? Ones I tried did not work or were Ser specific. By all means run this UrBACE sequence from Mylnosiga fluctuans (ORF within GGOI01019559) where you can see putative Cys in the oily tail #bioinformatics
000
Christopher Southan @cdsouthan.bsky.social · 07/05/2026
Anyone tried this out? #savemetime
000
Christopher Southan @cdsouthan.bsky.social · 05/05/2026
Does anyone have an (ideally testable) explanation for what is going on here? #bioinformatics #BACE1 #BACEevolution lnkd.in/d4dZT6wc
000
Christopher Southan @cdsouthan.bsky.social · 28/04/2026
Indications of relative real-world utility of these would bgr8
000
Christopher Southan @cdsouthan.bsky.social · 25/04/2026
Good to see this despite these being "difficult times" Will these be adopted by @ebi.embl.org EPMC?
021
Reposted by Christopher Southan
BF Francis Ouellette @bffo.bsky.social · 23/04/2026
From #NCBI Insight | #PMC Continues to Improve New Search | #OpenScience #Publications #OpenAccess #Education | 🧪 🔓 ⬇️ ncbiinsights.ncbi.nlm.nih.gov/2026/04/22/p...
ncbiinsights.ncbi.nlm.nih.gov
PMC Continues to Improve New Search - NCBI Insights
In September 2025, PubMed Central (PMC) launched a new full text search. Some previously available features were not included in the initial release. Now, PMC is rolling out additional search features...
042
Christopher Southan @cdsouthan.bsky.social · 31/03/2026
Just when you were wating for Division of Medicinal Chemistry first disclosure annotation blogs two come along (even if separated by some months :) lnkd.in/YCMJGW
000
Christopher Southan @cdsouthan.bsky.social · 05/01/2026
2026 greetings from Sweden 42166 :)
010
Christopher Southan @cdsouthan.bsky.social · 26/12/2025
Good stuff but when can the results feed through to UniProt annotations?
010
Christopher Southan @cdsouthan.bsky.social · 18/12/2025
Yes, I have noticed some of these contaminating my GS citations :(
010
Christopher Southan @cdsouthan.bsky.social · 04/12/2025
Woo :)
000
Christopher Southan @cdsouthan.bsky.social · 29/11/2025
Gosh, remember those "Mitchell and Moyle" experimental papers well back in day at Dundee
010
Christopher Southan @cdsouthan.bsky.social · 25/11/2025
Last #greatcompoundrace of the year. 1) Elsevier | Life Sciences Reaxys stays out in front 2) Suggest CAS harmonise their web instances of different totals 3) Also suggest Royal Society of Chemistry ChemSpider puts total on front page (like it used to be) not just nested under "Promotion
000
Christopher Southan @cdsouthan.bsky.social · 24/11/2025
Great to attend the ELIXIR-UK All-Hands recently in Exeter and present our UK resource The IUPHAR/BPS Guide to PHARMACOLOGY update lnkd.in/dMUfbbci which was also recently published in the latest NAR Nucleic Acids Research Database Issue (see lnkd.in/dmHapSie)
000
Reposted by Christopher Southan
Greg Landrum @greglandrum.bsky.social · 06/11/2025
I know some people have had problems accessing the discord servers we use for the UGMs, so I'm trying an experiment with setting up a Zulip server for the #RDKit. If this works well, we can leave it up as an informal chat/discussion point for the community. rdkit.zulipchat.com/join/ay4ccup...
rdkit.zulipchat.com
RDKit
Zulip organization for the RDKit community
052
Christopher Southan @cdsouthan.bsky.social · 06/11/2025
Looks like that top one is not in PubChem yet
000
Christopher Southan @cdsouthan.bsky.social · 05/11/2025
So what was his final score? less than 99 I'm sure....
000
Christopher Southan @cdsouthan.bsky.social · 15/10/2025
Amen, a PubChem pop takes seconds
110
Christopher Southan @cdsouthan.bsky.social · 13/10/2025
Gosh, will this get me rich?
010
Christopher Southan @cdsouthan.bsky.social · 03/10/2025
Disaster :((
000
Christopher Southan @cdsouthan.bsky.social · 15/09/2025
Looking forward to presenting this on Wed 17 Sept uchealth.zoom.us/webinar/regi...
uchealth.zoom.us
Welcome! You are invited to join a webinar: Synergies between BindingDB and PubChem. After registering, you will receive a confirmation email about joining the webinar.
BindingDB Webinar Sep 2025
000
Christopher Southan @cdsouthan.bsky.social · 03/09/2025
Fine, but that seaweed might whiff a bit....
000
Christopher Southan @cdsouthan.bsky.social · 03/09/2025
Wow!
000
Christopher Southan @cdsouthan.bsky.social · 01/09/2025
But gruniad website still free for now
000
Christopher Southan @cdsouthan.bsky.social · 01/09/2025
ACS Washington presentation lnkd.in/dxvaQn9V A well attended joint CHAL & CINF session and thanks to Emilia Hietala and Collaborative Drug Discovery - CDD Vault
000
Christopher Southan @cdsouthan.bsky.social · 30/08/2025
Nice to see a steady engagement increase for my blog lnkd.in/ebDNdfG :)
000
Christopher Southan @cdsouthan.bsky.social · 13/08/2025
Pleased to attend American Chemical Society Washington next week with ACS CINF slots for "Update of InChIKey searching in Google" Aug 18 from 3:20 PM and "Mining the outputs of AI drug discovery from patents" August 21 9:05 (a CDD Vault collaboration)
010
Christopher Southan @cdsouthan.bsky.social · 05/08/2025
Good idea mate...
000
Christopher Southan @cdsouthan.bsky.social · 31/07/2025
Enjoyable break visiting my friend and leading Mosel Winemaker Franz-Peter Schmitz from Römerhof in Riol. Great to catch up on the wine technology, commerce and biochemistry as well as socially. New post pending as a follow on from a past blog cdsouthan.blogspot.com/2013/06/wine...
020
Christopher Southan @cdsouthan.bsky.social · 19/07/2025
Couple of recent posts at cdsouthan.blogspot.com
000