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Angel De la Cruz

@caztle1304.bsky.social
144 followers 117 following 0 posts

🏳️‍🌈 | BSc Genomic Sciences 🧬 | Bioinformatics 💻 |

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Reposted by Angel De la Cruz
Cynthia | Multiomics specialist | Founder of El Arkhe @cynthiasc.bsky.social · 13/02/2025
🚀 Interested in multimodal analysis with WNN in Seurat? Check out my recent RStatClub presentation, where we dive into Jaccard, canonical gene expression, and Silhouette for clustering evaluation! 📺 Watch here: speakerdeck.com/cyntsc/clust... 📑 Slides: www.youtube.com/watch?v=mE77... #RStats
speakerdeck.com
Clustering methods in multiome scRNA-seq and scATAC-seq
Main topics covered on this talk: Introducing the Weighted-Nearest Neighbor (WNN) for multimodal analysis A glance of WNN clustering algorithms availa…
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Reposted by Angel De la Cruz
Carlos García @carlos-glez18.bsky.social · 04/02/2025
curatedTCGAData is an R package available on Bioconductor that provides publicly available data from The Cancer Genome Atlas (TCGA) as MultiAssayExperiment objects. You can find more information at: bioconductor.org/packages/release/data/experiment/html/curatedTCGAData.html.
bioconductor.org
curatedTCGAData
This package provides publicly available data from The Cancer Genome Atlas (TCGA) as MultiAssayExperiment objects. MultiAssayExperiment integrates multiple assays (e.g., RNA-seq, copy number, mutation...
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Reposted by Angel De la Cruz
Ming Tommy Tang @tommytang.bsky.social · 03/02/2025
video tutorial here www.youtube.com/watch?v=4m4n...
youtube.com
How to Download and explore TCGA bulk RNAseq data
YouTube video by chatomics
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Reposted by Angel De la Cruz
Silvana Cristo @silvanaycristo.bsky.social · 01/02/2025
I explored scDotPlot from @bioconductor.bsky.social, an amazing tool for generating dot plots with scRNA-seq data 📊. It supports hierarchical clustering and works seamlessly with Seurat and SingleCellExperiment objects. 🧬 Details: bit.ly/3EhQO6Z #scRNAseq #Bioinformatics #DataVisualization
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Reposted by Angel De la Cruz
Daniela Robles-Espinoza @daniela-oaks.bsky.social · 20/11/2024
📢 ¡Atención estudiantes de licenciatura! ¿Vives en un país en desarrollo ("low- and middle-income country) como México o muchos otros en Latinoamérica? ¡El premio Sanger está abierto! 👩🏽‍🔬🦠🧪🧫 Participa para ganar una #estancia de #investigación con #beca completa: www.sanger.ac.uk/about/the-sa...
sanger.ac.uk
The Sanger Prize Competition 2025
Sanger Prize competiton 2025 for undergraduates interested in genomics, who are from low- and middle-income countries
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