Reposted by Caroline JachmannCompOmics @compomics.com · 16/06/2025From PTMs to proteins, from metadata to metaproteomics. CompOmics has got you covered at #EuPA2025! 0228
Reposted by Caroline JachmannRobbe Devreese @robbedevr.bsky.social · 23/02/2025🚀 New preprint alert! We've improved IM2Deep for accurate peptide collisional cross-section (CCS) prediction, even for peptides exhibiting multiple conformations in the gas phase! 🎯 Check it out here: www.biorxiv.org/content/10.1...biorxiv.orgCollisional cross-section prediction for multiconformational peptide ions with IM2DeepPeptide collisional cross-section (CCS) prediction is complicated by the tendency of peptide ions to exhibit multiple conformations in the gas phase. This adds further complexity to downstream analysi... 11510
Caroline Jachmann @carojachmann.bsky.social · 21/01/2025Do you want to explore the PTMs you identified in your last MS experiment in a fun, interactive way? Try it out on our PTMVision web server at ptmvision-tuevis.cs.uni-tuebingen.de and check out the new publication in JPR at doi.org/10.1021/acs....!ptmvision-tuevis.cs.uni-tuebingen.dePTMVisionPTMVision: Interactive Visualization of Post Translational Modifications | Understanding the intricate landscape of post-translational modifications (PTMs) is crucial for unraveling the co... 0107
Reposted by Caroline JachmannTine Claeys @tineclaeys.bsky.social · 07/01/2025🚨 Big news, #TeamMassSpec! 🚨 How do we unlock proteomics data reuse, tackle metadata challenges, and harness public (clinical) data for AI? Find out at HUPO-PSI Spring Meeting 2025! 📅 March 31 – April 3, 2025 📍 Tübingen, Germany (1/4)psidev.infoHUPO-PSI Spring Meeting 2025 – HUPO Proteomics Standards Initiative 1157
Reposted by Caroline JachmannCompOmics @compomics.com · 06/12/2024Today, @robbedevr.bsky.social and @carojachmann.bsky.social presented their work on #IM2Deep and #ProteoBench at #BePAc2024. Learn more at doi.org/10.1101/2024... and proteobench.readthedocs.io. 083
