Reposted by Anupama Jha, PhD
HiCFoundation is a Swiss army knife for Hi-C data. Any task that takes Hi-C as input will benefit from our pre-trained model. You can do resolution enhancement, reproducibility analysis, loop calling, prediction of epigenomic profiles, or single-cell Hi-C analysis. tinyurl.com/v3nmp6np
tinyurl.com
A generalizable Hi-C foundation model for chromatin architecture, single-cell and multi-omics analysis across species
Nuclear DNA is organized into a compact three-dimensional (3D) structure that impacts critical cellular processes. High-throughput chromosome conformation capture (Hi-C) is the most widely used method...
