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Alessio Buccino

@alessio-buccino.bsky.social
52 followers 65 following 9 posts

Electrophysiology tools, open source software, spike sorting, HD-MEAs and neuroengineering 🧠

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SpikeInterface @spikeinterface.bsky.social · 25/08/2026
Teaching extracellular #ephys analysis and #spikesorting with SpikeInterface at @neuroinformatics.dev Open Software Summer School at @sainsburywellcome.bsky.social in London this week! Course material is available here: neuroinformatics.dev/course_ephys...
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Alessio Buccino @alessio-buccino.bsky.social · 10/12/2025
For all #electrophysiology folks! We just released and end-to-end spike sorting pipeline for large scale ephys! It's based on Nextflow and SpikeInterface, fully reproducible and parallelized. Check out the preprint here: www.biorxiv.org/content/10.1...
biorxiv.org
Efficient and reproducible pipelines for spike sorting large-scale electrophysiology data
The scale of in vivo electrophysiology has expanded in recent years, with simultaneous recordings across thousands of electrodes now becoming routine. These advances have enabled a wide range of disco...
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Reposted by Alessio Buccino
Neurodata Without Borders @nwb.org · 18/11/2025
At #SfN25? Catch Alessio Buccino at the NWB/DANDI booth #3835 at 2pm today for a demo of @spikeinterface.bsky.social , a library for building full analysis pipelines for extracellular recordings: pre-processing, spike sorting, curation, visualization, & more. Select from 10+ sorters or run them all!
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Reposted by Alessio Buccino
International Brain Laboratory @intlbrainlab.bsky.social · 03/09/2025
Two flagship papers from the International Brain Laboratory, now out in ‪@Nature.com‬: 🧠 Brain-wide map of neural activity during complex behaviour: doi.org/10.1038/s41586-025-09235-0 🧠 Brain-wide representations of prior information in mouse decision-making: doi.org/10.1038/s41586-025-09226-1 +
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Alessio Buccino @alessio-buccino.bsky.social · 31/07/2025
New SpikeInterface version is out!
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Alessio Buccino @alessio-buccino.bsky.social · 30/06/2025
Last week, Samuel Garcia and I gave a public webinar on the SpikeInterface-GUI, a powerful tool for spike sorting visualization and curation. github.com/SpikeInterfa... If you missed it, you can check out the viedo on the @spikeinterface.bsky.social youtube channel: www.youtube.com/watch?v=oZl8...
youtube.com
SpikeInterface-GUI webinar - 26/06/25
YouTube video by Spikeinterface
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Reposted by Alessio Buccino
SpikeInterface @spikeinterface.bsky.social · 04/06/2025
#ecephys #spikesorting Hi all! 📣 We are giving a webinar on the SpikeInterface-GUI on Jun 26th, 6pm CET! The GUI has a desktop and webapp implementation and can be used instead of Phy. If you're interested, please register here: docs.google.com/forms/d/e/1F... Happy spike sorting!
spikeinterface.readthedocs.io
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Reposted by Alessio Buccino
SpikeInterface @spikeinterface.bsky.social · 07/02/2025
#ecephys #spikesorting Hi all! 📣📣📣📣📣📣📣 We just released SpikeInterface v0.102.0! List of major changes and a list of all PRs in the release notes here: spikeinterface.readthedocs.io/en/latest/re... You can update your current version with: >>> pip install -U spikeinterface Happy spike sorting!
spikeinterface.readthedocs.io
SpikeInterface 0.102.0 release notes — SpikeInterface documentation
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